Fragaria vesca (woodland strawberry): 101302718
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Entry
101302718 CDS
T02666
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03022
Basal transcription factors
fve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101302718
09124 Replication and repair
03420 Nucleotide excision repair
101302718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101302718
03400 DNA repair and recombination proteins [BR:
fve03400
]
101302718
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101302718
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101302718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
101302718
NCBI-ProteinID:
XP_004290857
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All DBs
Position
LG2:complement(18719262..18723573)
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AA seq
300 aa
AA seq
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MASVPSKLYADDVSLLMVLLDTNPFFWSSSSLPFSKYLSHVLTFLNSILLLNQLNQVVVI
ATGYSSCSYIYDSASAPGQGSDQGRMPALCSHLLKKLEEFVAKDEQLLKEGSAEGIPSSL
LSGSLSMALCYIQKVFRSGPQHPHPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPIDSC
YMGSNNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAFLQLPKSAGVDFRA
SCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEVPSTTNKKRKSSEPLLVS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtcccttcaaagctctacgccgatgacgtcagccttctgatggtcttgcta
gacaccaacccgttcttctggagctcatcgtctctcccattctccaagtatctctcccat
gtgcttacatttttgaactcgattttgctgctcaatcaactcaaccaagtagtggtgatt
gctaccgggtacagttcatgtagctacatctacgattcggcttcggctcctggccagggc
tctgatcaaggaagaatgccggcgctttgctctcacttgctgaagaagctggaggagttt
gtggccaaagatgagcagctgctcaaggaaggctcagctgaagggattccttcttcgctg
ttgtcggggtcgctgtcaatggctctatgctatatacagaaggtttttcgatcaggacca
cagcatcctcaccccaggattttatgcttgcagggatcgtcagatggacctgagcaatat
gttgcaatcatgaatgcaatattttctgcacagcgttccatggttcctatagactcttgc
tatatgggctctaataattctgccttcctacagcaggcttcatacattactggtggtgta
tatctgaagccccaacagccagatggactgcttcaatatcttacgacagtttttgccact
gatttgcattcccgagcatttttacagctccccaagtccgctggagtggattttcgtgct
tcgtgtttttgccataaaaaaacaatagacacaggctacatttgttctgtgtgcttgtcc
atattttgcaagcatcacaagaaatgttcaacttgtgggtcagtatttggtcaagcccag
tcagaagttccctcaacaaccaacaaaaaaagaaagtcttcagaaccgctcctggtatct
taa
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