Fragaria vesca (woodland strawberry): 101302758
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Entry
101302758 CDS
T02666
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101302758
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101302758
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
101302758
NCBI-ProteinID:
XP_004301125
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Position
LG5:complement(7898958..7900991)
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AA seq
677 aa
AA seq
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MRQGGGWLLCTTLLILLSLLCLSVEARHHSNIPRRALRTSNIPSTQDWYHAAKIAYPPSQ
VVLDNGIVQLTFSNPGGEITGIKYHVIDNLLGNKAKQTAYWDVMWRGKLYGFQGTEFRVI
SATEDHVEISFINTYNPSFSNDQMIPLTVDKRYIIQRGRSGFYAYAIFQRDEGWPELAIN
DVRLVFKLQQDQFNYMAVSDTRKRFMPTADDRSLSQQLAYPEAKLLSNATSNPLFYGEVD
DKYQYSTEDEDGKVHGWISTKSSVGFWLITPSTEFRAGGPLKQDLTSHVGPTTMCVFSSS
HYASKQLGLVFQQGEAWKKVYGPVFVYLNHAGLNSDPTTTLWDNAKEQMLEEVRSWPYNF
TQCPDFPASNQRGSVFGYLQVNDWYINRTSLVPASSAYVGLAAPGEVGSWQTESKGYQFW
TRADENGYFVIKDVRPGNYNLYAWVPGIVGDYKYEDEITIEPGSQITLQKLTYWPPRIGP
TLWEIGIPDRSSAEFYIPDPYPALLNKLDNNNHSDESDKFRQYGIWGRYGELYPEHDLVY
TVGVSDYRYDWFYAQVTRDTGKEMVGTTWQIQFELPKMAAPGDYMLRLALASAEYAELQI
RVNYENMPALFSTGRIGEDNAIARHGIHGLYWLFNVNVPRSQLHEGNNTLYLTQTRGENT
FVGVMYDYIRLEGPPLR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagggcggcggttggcttctttgcacaacattgctgatactacttagtctcctc
tgtctctccgttgaggctagacaccacagcaacatcccaagaagagccctcaggactagc
aatatccccagtacacaagattggtaccatgcggcaaagatagcataccctcctagccag
gttgtattggacaatggcattgtccaactcacattttctaaccctggtggtgagattaca
ggaatcaaatatcacgtaattgacaacttactcggaaacaaggccaaacagacagcctac
tgggatgtgatgtggaggggcaagctttacggatttcagggaacagaatttagagtaatt
tctgcgactgaagaccatgttgaaatttctttcatcaacacatacaatccttccttctct
aatgaccaaatgatccctttaacagttgacaaaaggtacataatacagcgaggtcgttca
ggcttctatgcatacgccattttccagcgagatgaagggtggccggagctggccataaac
gacgttcgactagttttcaagcttcagcaagatcaattcaactacatggcggtatcggat
actagaaaaaggttcatgccaacagctgacgaccgaagcctaagtcagcaactggcctat
cctgaagctaagcttttaagcaatgcaacaagcaatcctctcttttatggagaagtggat
gacaagtatcagtactcaactgaagacgaagacggcaaagtccatggttggattagtacc
aagtcatctgtgggattttggctgatcacaccaagtactgagtttcgtgctggtggacct
ctgaagcaggacctcacctcccacgtcggtccgacgacaatgtgtgtgttctctagcagt
cattacgcttcaaaacaacttggattggtattccaacaaggtgaagcatggaaaaaggta
tatggacctgtatttgtgtatcttaatcatgctggtctaaatagtgatcccactactaca
ctttgggacaatgctaaagagcagatgcttgaagaggtcagaagctggccttacaacttc
actcaatgccccgattttcctgcttcgaaccaacgaggatcggttttcggatacttacaa
gtaaacgattggtacattaacagaaccagcctcgttccggcaagctcggcttatgtggga
ttggctgcacctggagaagtgggatcatggcaaacagaaagcaagggataccagttttgg
actcgagcagatgaaaatggctactttgtcatcaaggatgttagacctgggaactataac
ttgtatgcatgggttcccgggattgttggagattacaaatatgaggacgagattactatt
gaaccaggaagtcaaatcacgttgcagaagcttacttactggcctccaagaattggtcct
acattatgggaaattggcatccctgaccggagttctgccgagttttacataccagatcca
tatccagctctgctgaacaaactcgataacaataatcactcagatgagtcagacaagttc
aggcagtatgggatttggggacgttatggagaattataccctgaacatgatctagtctac
actgttggtgttagcgattaccgttatgattggttttatgctcaagtgactagggataca
ggaaaagaaatggttggcaccacatggcagattcaatttgagcttcctaaaatggcagct
cccggagattatatgctccgactggcattggcctcggctgagtacgcagagctgcagatt
cgagttaactatgaaaacatgccagctctgttctcaacagggcggataggagaggacaat
gctatagcaaggcatggaatccatggtttgtattggctgttcaatgttaacgtaccaagg
tctcaactgcatgaaggaaacaacacgctgtatcttactcagacaagaggtgaaaatact
ttcgtaggagtcatgtatgactacatcagactagaaggacctccattgcgatga
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