Fragaria vesca (woodland strawberry): 101302811
Help
Entry
101302811 CDS
T02666
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101302811
Enzymes [BR:
fve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
101302811
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101302811
Prokaryotic type
101302811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
101302811
NCBI-ProteinID:
XP_004292926
LinkDB
All DBs
Position
LG2:22974732..22976892
Genome browser
AA seq
591 aa
AA seq
DB search
MENPDTTKPTRSPPPPPPQQQPDPKKLKMSTTTTDDEQTAATTQKQRLKRRKVAIFFAYC
GVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEQDRSNPKRYDWARSARTDKGVSAVGQVV
SGRFYVDPPGFVDRLNSHLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSAH
RDRESVKASLGSDEEFVKCLECSDRGRKVGGLMGKRTYQLRGGNSYNSESVTEISTNDDM
KIDNDIEGEDNVVVGNADMNSAEEVNGGEKKAVEGSGFCYGEKEKERFNRILSCYQGTHN
FHNFTTRTKAEDPAAIRYIISFSANATVTVEGIEFVKCEVVGQSFMLHQIRKLIGLAVAI
MRNCAPESLLERALQKDVNVNVPTAPEVGLYLDECFFSSYNQKWGDTHEEVSMKGYEAEA
EAFKMKHIYTHIGATEHKEGVVGLWLHSLNHRNYPDLGAENNGDTSNGKTAEISSTDNNG
DTINCKTADISADNNGDTSNVKTADISSVDNNGHTSICKTADISAENNGDTCNGKTADIT
IAENNGDTSKCKTAYISADHSGDASNGDTTVEKKTDDIASADNNQDTSRAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacccagacactacaaaacccacaagatcaccaccacccccgccgccgcaacaa
caaccagaccccaagaagctcaaaatgtccaccaccaccaccgacgacgaacaaaccgcc
gccaccacccaaaagcaacgcctcaaacgccgcaaggtcgcaatcttcttcgcctactgc
ggcgtcggataccaaggaatgcaaaagaatcccggcgccaagaccatcgaaggcgacctc
gaagaagccctctacctctccggcgccgttccggagcaagaccgcagcaaccccaagcgt
tacgactgggcccgctcggcccggaccgataagggcgtcagcgccgtgggccaggtcgtg
tcgggtcggttctatgtcgacccgccggggttcgtggaccgcctcaattcgcacctctcc
ccgcaaattcggattttcgggtacaagcgcgtgacggcgtcgtttaatgcgaagaagttt
tgtgatcggaggaggtatgtttatcttattcctgtctttgctcttgatccgagtgcgcat
agggatagagagagtgtgaaggctagtttggggtctgatgaggagtttgttaagtgcttg
gagtgctctgataggggccgaaaagtcggtggattaatgggtaagcgcacttatcaattg
agaggaggtaatagttacaattcggaatcggtaaccgaaattagcactaatgatgatatg
aaaatcgacaatgatattgagggtgaggataatgtggtggttggcaatgctgatatgaac
tctgcggaggaggtgaatggaggggagaagaaggctgtggaggggagcgggttttgttac
ggtgagaaggagaaggaaaggtttaataggatcttgagttgttatcagggtactcacaac
ttccataacttcaccactagaactaaggctgaggaccctgctgccatacggtacattatt
tcgttcagtgcaaatgccacggttacggttgagggtattgagtttgtgaagtgtgaggtt
gtggggcagagcttcatgcttcatcagattaggaagttgattgggctggcggtggcgatc
atgaggaactgtgctcctgagtcgttgttagaaagagctttacaaaaggatgttaacgtt
aatgtgccgacggctcctgaggttggtttgtacttggatgagtgcttcttctcatcatat
aaccagaaatggggagatactcatgaggaagtgtcaatgaaaggctatgaggcagaggcg
gaagctttcaaaatgaagcatatatacactcatattggagctactgagcataaagaaggt
gttgtgggtctctggttgcactctctaaatcaccgcaattatccggatttaggtgctgag
aacaatggagacaccagcaatggaaagactgccgagatctccagtactgacaacaatgga
gacaccatcaactgtaaaactgctgatataagtgccgacaacaatggagataccagcaac
gtgaagactgccgatatctccagtgttgacaacaatggacataccagcatctgtaaaact
gctgatatcagtgctgagaacaatggagatacctgcaacggaaagactgctgatatcacc
attgctgaaaacaatggagacaccagcaagtgtaaaactgcctatatcagtgctgaccac
agtggagatgccagcaatggagacaccacggtggaaaaaaagactgatgatatcgccagt
gcggataacaaccaggacaccagcagggccgagtaa
DBGET
integrated database retrieval system
