Entry |
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Name |
(RefSeq) protein argonaute 16-like
|
KO |
K11593 | eukaryotic translation initiation factor 2C |
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Organism |
fve Fragaria vesca (woodland strawberry)
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Brite |
KEGG Orthology (KO) [BR:fve00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:fve03019]
101302823
03036 Chromosome and associated proteins [BR:fve03036]
101302823
Messenger RNA biogenesis [BR:fve03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101302823
Chromosome and associated proteins [BR:fve03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101302823
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101302823
microRNA pathway
RISC loading complex
101302823
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
LG4:complement(3000209..3006967)
|
AA seq |
889 aa
MEDLPPPPPVVPPNGKPEVVALAPPKHSIMVRPRGGGTTGRRIQLSTNHFKVSVKNPDAV
FYQYCVLITYEDNRPVEGMRIGRKLVEKLYQTYSSEFGGKKFAYDGEKALYTVGPLPQNK
FEFTVVLEESFAKSENGKSGETEKRMKRCSNRSKSFNVEISYAAKIPLKSIALALQGAEV
DNTQDTLRVLDIILRQKAAKMGCLLVRQSFFHDDSRSFVEIGGGVTGVRGFHSSFRPTQG
GLSLNMDVSTTMIVTPGPVIDFLLTNQGVREPRYIDWVKAKRMLKNMRVTTRHRNMEYKI
SGLSEKTCYNQYFTLKLRSHDGTNEEENVEISVYEYFVKHCGIELTYSKDMPCLDVGKPK
RPTYVPIELCSLISLQRYTKALSSLQRVSLVEKSRQKPLERIKSVTDALRNYKYDEDPVL
AECGIFIEKQLIQMDGRILETPKLKVGNSEDMMPFKGRWNFKGKSFLDPRRIDSWLVVNF
SGRCDISQISRELINVGKKTGIHMERPKTLIEEDPRAERLGPVARVDKMFEQIQAKLQEP
PEFILCVIPKKGSDIYGPWKKKALVDFGIPTQCISPPKLSDPYLTNVLMKINTKLGGINS
LLALEHCSRVPLIKDTPTMILGMDVSHGSPGRSDVPSVAAVVGSRNWPLISRYRAAVRTQ
SPKVEMIDGLYKPLPNGDDDGIIRELLLDFYKTSQGRKPTQIIVFRDGVSESQFNQVLNI
ELDQIVKAYQHLGEENVPKFTLIIAQKNHHTKLFQSNSPDNVPPGTVVDTKIVHPRIYDF
YMCSQAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYVYQRSCTAISIVAPICYAHL
AAAQVGQFMKFEDLSETSSAKGSVTTSESIPVPELPRLHDKVQGSMFFC |
NT seq |
2670 nt +upstreamnt +downstreamnt
atggaggatttgcctccgccgcctcctgtcgtaccacccaatgggaagccggaagtcgta
gctctggctcctcctaagcactctattatggttaggccacgtgggggtggaactacaggg
cgccgcatacaattgagcactaaccacttcaaagtttctgtgaagaatccagatgctgtg
ttttaccagtactgtgttctgataacttatgaagataacaggcctgttgaaggcatgaga
attgggagaaagctggtggagaagctctatcaaacatactcttcagagtttggaggtaaa
aagtttgcatatgatggggagaaagctttgtacacagtcggtcctctcccacaaaacaag
tttgagttcactgttgttctggaggagtcatttgcaaagagtgaaaacgggaagtctggt
gagactgaaaaaagaatgaaacgctgttccaatcgctctaaatctttcaatgtagagata
agttatgctgccaaaatacctctcaaatcaattgctcttgcccttcaaggagctgaagta
gacaacactcaggatacattgagagtgcttgatattattctacggcagaaagcagctaag
atgggatgccttctagtacgacagtcattcttccatgatgactccaggagctttgttgag
attggaggaggtgtgactggtgtccggggatttcattccagtttccgtccaactcagggc
ggcttgtccttgaatatggatgtatctacaacaatgattgtaacgcctggacctgttatt
gattttctgttaaccaaccagggtgtgcgagaaccccgctacattgactgggtaaaggcc
aaaagaatgctgaaaaatatgagggttacaacgagacaccgtaacatggagtacaaaatc
tctgggttgagcgagaagacctgctataatcagtattttactctgaagttaaggagtcat
gatggcacgaatgaggaggagaatgtggagatttcagtgtatgaatatttcgtcaaacac
tgtggcatagagctcacttattcaaaagacatgccatgccttgatgttggcaagccaaag
aggcccacatatgttccaattgagctatgttcacttatttcactacaaaggtatacgaaa
gcattgtcttcactgcagagagtgtccttagtggaaaaatcaaggcagaagcctctggag
agaataaaaagtgtgactgatgctttacgaaattacaaatatgatgaagatcctgtcctt
gctgaatgtggtatatttatagagaagcaactgattcaaatggacggccgcattcttgag
actccaaagttaaaggtaggtaacagtgaggacatgatgccctttaagggacggtggaac
ttcaaaggaaagtcatttttggatcctagacgtattgactcttggctagttgtcaacttc
tctggacgctgtgacattagtcaaatctctcgggagcttatcaatgtcgggaagaagact
ggaattcatatggagcgccccaaaactcttatcgaggaagatccgcgagctgaaagacta
ggacctgttgcaagagtcgacaagatgtttgaacagattcaggctaagctccaagaacca
cctgagttcattctctgtgtcataccaaagaaaggttccgatatctatgggccttggaag
aaaaaagctctggtagactttgggattccaacacaatgtatttctccacccaagctgagc
gatccatacctgactaatgtcctaatgaaaatcaacactaagcttggaggaataaattct
ctgttggctctggagcactgctcacgtgttccgcttataaaagatactcctacaatgatt
ttggggatggatgtctcgcatggttctcccggacgatcagatgttccttcagttgctgcg
gttgttggctctcgtaattggcctcttatatcaaggtacagagcagctgttagaacacaa
tctcctaaggtggagatgattgatggtctatacaagccacttccaaatggagatgatgat
ggtattatcagggaacttcttctggacttctataagacaagccaaggacgcaaaccaact
cagattattgttttcagggatggagtcagtgaatcacagtttaatcaagttttgaacatc
gagctggatcaaattgtaaaggcttaccagcaccttggggaggaaaatgttccaaagttc
actctcattatagctcagaagaatcatcacacaaagctattccaatctaatagccccgat
aatgttccaccagggacagttgttgacacaaaaatcgtgcatccaaggatctatgatttc
tacatgtgttctcaggctggcatgattgggacttcaaggccagcgcactatcatgtcttg
cttgatgagattggcttttcccctgatgacttgcagaatctgattcactccctttcttat
gtgtaccaaaggagctgtacagcaatatccattgtggcacccatatgctatgcgcacctt
gctgcagcacaagtggggcagtttatgaagtttgaagatctctcagaaacttcatcagcc
aaaggtagtgtcacaacatcagagagcatcccagttccagagctccctaggcttcatgac
aaggtccagggctccatgttcttctgctaa |