Fragaria vesca (woodland strawberry): 101303052
Help
Entry
101303052 CDS
T02666
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101303052
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
101303052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
101303052
NCBI-ProteinID:
XP_011468358
LinkDB
All DBs
Position
LG6:complement(195105..197627)
Genome browser
AA seq
625 aa
AA seq
DB search
MADLDDLLLEAAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPS
GSQVPLKKRLDPSEVDDERDSQDEGDYNDSGSDRGGESNESDVGSDLYKDEDDRRKLAEM
SELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSRVRSSARSADRAA
AKDDALNELRAKRLKQQDPEAHRKLRDVSRGSVGSKNFSHTIKKSFSAVRRSSSSQSDSE
SRSHSDDEGSSADDAIDSDDERGNQGLTFEDIKEITIRRSRLAKWLMEPFFEELIVGCFV
RVGIGKTKSGRPIYRLCSVRNVDSSDPDRQYKLENKTTHKYLNVVWGNENSAARWQMAMV
SDSLPLEEEYDQWVREVEKNGGRLPSKEDVLEKKEAIKKTNTFVYSAETVKQMIQEKKSA
SSRPLNIALEKDRLRRELEIAQSKHDDAEVERIKARLEQLEARRQSQGKDSKAVRLAEMN
RKNRVDNFYYVSKPDEQKDDAEANAVAAESLAEVETNGTGGVVAVRAGLEATAAALEAAA
GAGKLIDTMAPVDQGTSSNPLHNFELPISLATLQKFGGPQGAQEGFMARKQRIEATVGVR
VPEDDGRRHALTLSVSDYKRRRGLL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttggatgatttgctcttggaggcagcaggaagaacaagttcggggcggaaa
agccggcactcacattcatcttcaaagaggagacgtgatgattcatattctgatggtgga
agtgactctaggggtgatgactctgatgatggtcgtggctatgcgagtaggaaaccctca
ggatctcaagttcctttgaagaagcggctggacccttcagaagtagatgatgaacgtgac
agccaggatgaaggtgattataatgatagtggctctgatcgtgggggtgagagcaacgaa
tctgatgtcggcagcgatctttacaaagatgaagatgacaggcgaaagcttgcggagatg
tctgaacttcaaagagagctgattctgtctgatagagcacagaagaaagatgataagagt
ctaaaggagaaattcagaccaaagtgggataaagggaaggctacacagtccaggaaagtg
actccgcctctcccatcttctcgagtgcgctcctcagctagatctgctgacagggcagct
gccaaagatgatgcattgaatgagttacgagcaaaacgtttgaaacagcaggaccctgaa
gctcaccgtaaattgagagatgtatctagaggaagtgtggggagtaagaatttctcacac
accatcaagaagtctttctctgctgtccgtcggagtagctctagtcagagtgacagtgaa
agtcggtctcatagtgatgatgaagggtcaagtgcagatgatgctattgacagtgatgat
gaaaggggcaatcagggattaacatttgaagatataaaggaaattaccattcggaggtca
agacttgcaaagtggcttatggaaccattctttgaagaattaatcgtgggttgctttgta
cgggttggaattgggaagactaagtctgggcggcccatctacaggctgtgctcggtccgt
aatgtggactcttcagatcctgatcggcagtacaaactagagaataaaaccacacacaag
tatctgaatgtggtttggggcaatgaaaactccgctgcccggtggcagatggctatggtt
tcagactctttgcctttagaagaggagtatgatcagtgggtcagagaggtggagaaaaat
ggtggccgcttgccaagcaaagaggatgtgctggaaaaaaaggaagccataaaaaaaacc
aatacatttgtctactcagccgaaactgtgaagcagatgatacaggagaaaaaatctgct
tcatcaaggccattgaacattgcgcttgagaaggaccggttgaggagggaattggaaatt
gcacaaagcaagcatgatgatgcagaggtggaaaggatcaaggcaaggcttgagcagttg
gaagcacggcgacaatcacaggggaaagatagcaaggctgtcaggcttgctgagatgaac
agaaagaatagagttgataatttttactatgtttcaaagcctgatgaacaaaaagatgat
gcagaggccaatgctgttgctgctgagtcattggcagaggtagagactaatggaacagga
ggagtagtagcagtacgagctggcttggaagccacagcggcagctctggaagctgcagct
ggtgctgggaagttgattgatacgatggctccggttgatcaaggaacatcgtcaaatcca
ttgcacaattttgagctgccaatctcgttggccacacttcagaagtttggtggcccgcaa
ggagctcaggaaggattcatggcaagaaaacaaaggatagaagcaacagttggtgtccga
gtaccagaggatgatgggaggaggcatgcattgacgctttcagttagtgactacaagaga
agaagagggcttctctga
DBGET
integrated database retrieval system
