Fragaria vesca (woodland strawberry): 101303072
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Entry
101303072 CDS
T02666
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101303072
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101303072
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101303072
NCBI-ProteinID:
XP_011470459
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Position
LG7:600736..603075
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AA seq
283 aa
AA seq
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MEEVKLMVKGNTHKFHFEPNFELYIFIRDILPQALHINDCHGLRLSDITHIDSARNHISI
SGCNDVEVSGILIRAPADSPNTDGIDISTSTNINIRDSSIGTGDDCIAINSGTSHVNVTG
VLCGPGHGISIGSLGEHGSYSMVEDVQVRKCTFNGTTNGARIKTWKGGSGYARDIIFENI
TIQAIKNPIIIDQEYSDVLYTGFGTLHDQGSAVQVSDVTFRDFQGSVSGDVAITLDCDNR
VGCKNIVMDHIDLTSSVHGKKVAAYCKNVRGLRTSLSPSVTCD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtcaaattgatggtcaagggcaatactcataagttccattttgaaccaaat
tttgaactatatatattcattcgtgatattttgccgcaggctctccatattaacgactgt
catggtctccggttgagtgatattacgcatattgatagtgcgaggaaccatatcagcatc
agcggctgcaatgatgtcgaagtttctggtatccttattagggctccagcagatagtcca
aacactgatggaattgacatctctacatcaaccaatatcaacattcgagattcttctata
ggcactggtgacgactgtattgcaatcaattctggtacatctcatgtcaacgttactggt
gttttgtgcggtccaggccatggtataagtatcggaagtcttggtgagcatggttcgtat
agcatggtggaagatgtgcaagtgagaaagtgcaccttcaatggcacaacaaatggagca
agaatcaagacatggaaaggcggatcagggtatgctagggacatcatttttgagaatatc
acaattcaagcaatcaagaaccctatcattatagaccaggagtattctgatgttctctat
actggatttggaaccctgcatgaccaaggaagcgctgtacaagtgagcgacgtgacgttc
cgtgactttcagggatctgtttctggggatgtagccattactttggactgcgacaatcga
gtaggctgcaaaaacattgtaatggatcacatcgacttaacttcgtccgttcatggcaag
aaggttgctgcctactgcaagaacgtccgaggattacgtacttcattatctcctagtgtg
acatgcgattaa
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