Fragaria vesca (woodland strawberry): 101303131
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Entry
101303131 CDS
T02666
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101303131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101303131
Membrane trafficking [BR:
fve04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101303131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
101303131
NCBI-ProteinID:
XP_004301053
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Position
LG5:6646638..6660506
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AA seq
1113 aa
AA seq
DB search
MAAFVPPPGAPRPNNNSNTPPPPPPNYNAQRSPDSLSENMHNLNLNRQQQPPNMPNYAPR
PSPFGQPPPFPGASAPYSRPGPPPARPAAPPQATLPPGTTGVRPTGPPAGQSSLFGSRPP
PGSFPPGVAPISRPASSPFQTTGLPSGPVATPPAPSSGPRSGPGPFASGQAVPPMGAPGR
MSNGPPAFGSGAVPGAPRFPLTGNLPQPPVGPQPPMSGAPRTPTMHSVLGGPAVSAPPGS
TAQQAPPFSSGPQGMRPPPPGSPYSQQSWLMQQGQVAPPTQFPGAAPPPQFPGSSPPPQF
PGSSPHPQFPGSAQPPRMYGMPPQPLPNQSMTTISSAANQTGTPVGSSKIDPNQIPRPGP
SSSVLLHETRQANQANPPPPATSDYIVRDNGNCSPRYMRCTINQIPCTADLLTTSGMPLA
LLVEPFALPHPSEEPIQVVDFGESGPVRCSRCKGYINPFMKFIDQGRQFICNLCGFTDET
PRDYHCNLGPDGRRRDADDRPELCRGTVEFVASKEYMVRDPMPAVYFFLIDVSMNAVQTG
ATAAACSAINQVIADLPEGPRTLVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPL
ETDVVVQLSECRKHLEELLESIPTMFQTSKTAESAFGAAIKAAFLAIKSTGGKLLVFQSV
LPSTGIGALSAREAEGRANISSTEKEPNKLLQPVDKTLKTMAIEFAEYQVCVDLFITTQS
YIDIASISVIPRTTGGQVYYYYPFSAVSDPAKLYNDLRWNVTRPQGFEAVMRVRCSQGIQ
VQEYFGNFCKRIPTDVDLPGIDCDKTIMVMLKHDDKLQDGSECSFQCAVLYTTVYGQRRI
RVTTLSLPCTSMLSNLFRAADLDTQFSCYMKQAANEITSSPLVRVREQMTNLCISSLFSY
RKYCATVSSSGQLILPEALKLLPLYTLALIKSTGLRTDGKIDERSVWINHVSSLSVPLAV
PLVYPRMVAVHDLDAKKEGDESLIPPVIPLASEHVSDDGIYLLENGEDCLIYVGNLVDSG
ILQQLFGVGTADALPTQFVLQQYDNSLSKKLNNVVNEIRRQRCSYLRLKLCKKGDPSGAF
FLSHLVEDQSPHGPSYVEFLVHVHRQIQIKMSS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttttgtgcctccaccaggggcacctaggcccaataataacagtaacacccca
ccaccaccacccccaaattacaatgctcagagaagccctgattcgttatccgaaaacatg
cacaatttgaaccttaatcggcagcagcagccgcctaacatgcccaattatgctcctaga
ccatcccctttcggccaacctccacccttcccgggtgcatccgcaccttattctcgcccc
ggccctcccccggccagacctgcagctcctccgcaagcaacattaccccctggcaccacc
ggagtgagacctactggcccacctgctggtcagtcttcactttttgggtctagaccgcct
cctggttctttccctcctggggtggctcctatttctcggccagcttccagtccttttcag
acaacggggttgccaagtggtccggttgcaacgcctccggctccatcatcaggtcctcgc
tctggtcctgggccgtttgctagtggtcaggctgtgcccccaatgggtgctccagggaga
atgagtaatgggccaccggcctttggctccggggctgtgccaggtgcacctcgttttcct
ctaactggaaatttacctcaaccacctgttggacctcaaccaccaatgtcaggggctcct
cgtactccaaccatgcattcggtgctcggtggtccggcagtcagtgccccaccaggatct
actgctcaacaagcaccgccattttcgtcgggtcctcaaggcatgcggcctcctcctcct
ggttctccttatagccaacagtcgtggctaatgcaacaagggcaggtggctccacctaca
caatttcctggggctgctccacccccacaatttcctggctcttctccacctccacaattt
cctggctcttctccacatccacagtttcctggctctgctcaaccacctagaatgtatgga
atgccaccacagccacttccaaatcagtctatgactaccatctcatctgctgccaatcaa
actggaactcctgtggggtcatcaaagattgatcccaatcaaattcctcggcctgggcca
agttcttcagtacttctgcatgaaactcgtcaggccaatcaagcaaatcctcccccgcct
gctacaagtgattatatcgtcagagataatgggaattgcagtccacgttacatgaggtgc
accatcaatcagataccatgcactgctgatcttttgacaacatcagggatgccgttagct
ttgttggttgaaccttttgctcttccgcatccatctgaggaaccaattcaggttgtagat
tttggtgaaagtggtcctgttcgatgttcacgttgcaaaggctacataaatcctttcatg
aagttcatagaccagggcaggcaattcatctgcaacttgtgtggatttactgatgagacc
ccccgtgactaccactgcaatctaggtccagatggcagacgtagagatgctgatgatcgg
ccggagctatgtaggggaacagttgaatttgttgcctcaaaagaatacatggtgcgcgat
cccatgccagctgtgtacttcttccttattgatgtatccatgaatgcagtacaaactggt
gcaactgctgcagcttgcagtgcaatcaatcaagttattgctgaccttcctgaaggtcct
cggacactggtggggatcgctacatttgactcgacgattcatttttacaatttgaaacgt
gcactgcagcagcctttgatgcttattgttcctgatgtacaagatgtttacactcctcta
gagactgatgtggttgttcagctttctgagtgccgtaaacatttggaggaattgctggaa
agtattccaactatgtttcagactagtaaaactgctgagtcagcttttggtgcagcaatc
aaggctgctttcttggcaataaagagcactggagggaaactgttggtgtttcagtcagtg
ttgccatcaactggaattggagcgctttctgctagagaggctgaaggaagagctaatata
tcttcaactgagaaggagcccaataagttactccagcctgtagacaaaactttaaagaca
atggccattgaatttgccgaatatcaggtttgcgtggatttatttatcactacccagtca
tatatagatattgcttctatctcagtcatccccagaacaactggagggcaggtctactac
tattaccccttttcagctgtctctgatcctgcaaagctgtacaatgatcttagatggaat
gtcacaaggcctcaaggttttgaggcagtgatgcgtgtaagatgcagccagggcattcaa
gttcaagagtactttggaaacttttgcaaacgcattccaacagatgttgacctacctggg
attgactgtgacaaaactattatggtaatgttaaagcatgatgacaaattacaggatggc
tcagaatgttctttccagtgtgctgttttatacacaactgtgtatggccaacggcgaatt
cgggtcaccactttgtctctgccatgcactagcatgctaagtaatctgtttcgtgctgcg
gatttggacactcagttttcatgttacatgaagcaagcggcaaatgaaattacttcaagt
ccccttgtgcgtgtacgggaacaaatgacaaatctttgcatcagtagtctgttttcatat
cgcaaatactgtgctactgtgtcatcttcgggacagcttattcttccagaggcactgaag
ctcctgcccctttacacccttgccttaatcaaaagtacaggactacgaactgatggaaaa
attgatgagcggtctgtctggatcaaccatgtgtcctccctttcagtacctttggcagtt
ccactggtgtatcccaggatggtggctgtccatgaccttgatgctaaaaaggagggtgat
gaatctcttattcctccggtgattccacttgctagtgaacatgttagtgatgatggaatt
tatcttctggagaatggtgaggactgtttaatatacgttgggaacttggtggattctgga
attttacaacagctgtttggcgtcggcactgctgatgcacttcctactcagtttgtgctg
cagcagtatgataattcattatcaaagaagctgaacaatgtggtaaatgaaatacgccgc
cagagatgttcctacctgcgattgaaattgtgcaagaaaggagatccttcaggagcattc
ttcttgtcacatctggttgaagaccagagtccccatggcccctcctatgttgagtttctg
gtacatgtccatcggcaaatacagataaaaatgtcttcataa
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