Fragaria vesca (woodland strawberry): 101303228 Help Entry 101303228         CDS       T02666                                  Name (RefSeq) uncharacterized LOC101303228   KO K06100   symplekin Organism fve  Fragaria vesca (woodland strawberry) Pathway fve03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:fve00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     101303228  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:fve03021]     101303228    03019 Messenger RNA biogenesis [BR:fve03019]     101303228 Transcription machinery [BR:fve03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      101303228 Messenger RNA biogenesis [BR:fve03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      101303228     U7-dependent histone pre-mRNA processing factors      101303228 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Adaptin_N Motif Other DBs NCBI-GeneID:  101303228 NCBI-ProteinID:  XP_004299835 LinkDB All DBs Position LG5:14758115..14767358 Genome browser AA seq 1359 aa AA seqDB search MSSSLFAPPRKPLFKTLTPNSTAFHTMAGGAGGGALNTQALSLLAAVNNHGDLAVKLSSL KQAKDLLLSIDSSSAADLFPYLVELQSSPETLVRLSLIQVIEEIGLRAMEESSVLMSVLL AFLRDSDSLVARQSIVSGTNVFVGVLEELTLQFHRRGKIEIWLEELWSWMVKFKDAVFTI AVQPGSAGTKLLALKFLETYVLLFTSDTDDSEKPIAEGCRRGFNISWLVGRHPILDSYML MSEANRALGILLNLLQSAGSLRGSLTIAIVNCLAAVARKRPVHYGTVVSALFDFDPNFEA AKGRHVPSIQYSLRTAFLGFLRCTSPVIVESRDRLLRALRSMNAGDAADQVIRQVDKMLK YNERASRDARSGKDDHQSSQLPVSGDLVRKRPSPLDVEESANGHEIPSKRSRYTHEAYST LPVQKNDSGWDTTSVNGVSSELPMLDGEVTPVEQMITVIGALLAEGERGAESLEILVSTI HPDLLADIVITNMRHLPKMPPPLARPGLPVARQIGSLSSSAQVISESPTSSVQSPVLAAQ MSFSSATVNSLSVADTSNVNNLPADSKRDPRRDPRRLDPRSIAVSAELASSPAVEDTTSM QSDIDGSVSLNKLNSHPILTTVESTLVTPNPKTESDGMILDGQLVSGTDQPTPMDEILDG PVEDDPTLKVNVSSDLTDSRVQTDEDLEAMPLSDVGLADDDYTTSFIESDQRSPALSNTS EEICQDLPDVPIYIELTQEQKQRLGHMAVERIIQSYKHLHGTDYSQMRLALLARLVAQID VDDEIIVMLHKHIVVDYQQKKGHELVLHILYHLEALALSESVESSTFAVMYEKFLLAVAK CLLESFPASDKSFSRLLGEVPVLPNSTLKLLDDLCYSDVIDQHGKDVRDTERVTQGLGAV WSLILGRPQYRQSCLDITLKCAVHPQDDIRTRGVRLVANKLYQLSYISEVIEKFATDMLL SAVEQPTSGIEHSQSESTGRKTDGTLGSQETSVNHVQNLEFANSENDSITKERPVSMMSI PEVQRLISLFFALCTKKPSLIQLVFNTYGCAPQAVKQAFDRNIPVLIRALGSSNTDLLHI ISDPPQGSENLLMLVLQQLTQERTPSSDLIGTVKHLYETKLKDVTILIPMLSSLTKNEVL PIFPRLVALPLEKFQTALAHILQGSAHTGPALTPAEVLVSIHNIVPDKEGLTLKKITDVC SACFEQRTVFTQQVLAKALNQMVDQTPIPLLFMRTVIQAIDAFPSLVDFVMEILSKLVRK QVWRMPKLWVGFLKCASQTQPHSFHVLLQLPPPQLESALNKYANVKGPLAAYASQASIKA SLSRPTLAVLGLANEPHLHQSHLSSPPFHPTDATSSTPT NT seq 4080 nt NT seq  +upstreamnt  +downstreamnt atgtcctcttctctctttgccccacccagaaaacccctcttcaaaaccctaacacccaat tccaccgccttccacaccatggccggaggagcaggcggcggagctctcaacacccaagcg ctctctctcctcgccgccgtcaacaaccacggcgatttggctgtcaagctctcctcttta aaacaggccaaggatttgctcctctccatcgactcctcctccgccgccgaccttttcccc tacttggtcgagctccagtcctcccccgaaaccctcgtccgcttatctctcatccaggtg atcgaggagattggcttgagagcgatggaggagtcatctgtactgatgtctgtcctattg gcgtttttgagagacagtgattctcttgtcgcaaggcaatctatagttagtggcacgaat gtttttgtcggtgtcttggaggagttgacgttgcagtttcaccggaggggtaaaattgag atatggcttgaagaactttggtcgtggatggttaagttcaaggatgctgtattcaccatt gcagtacagcctggttctgctggaacaaagttgctcgcgttgaaatttttggaaacatat gttttgctattcacatcagacaccgacgattctgaaaaacctatcgcagaaggatgtaga agaggtttcaatatttcgtggctggttgggagacaccctattctcgactcgtacatgctc atgtcagaagcaaatagggctcttggaattctattgaatttgttgcagtcagctggtagt cttcggggttccttgacaattgccattgttaattgtcttgcagctgtagcaagaaagagg ccagttcactatggcaccgttgtttctgcactatttgattttgatccaaactttgaagca gcaaaaggacgccatgttcccagtatccagtattctttaagaactgcctttttgggattc cttcggtgcactagtccagtgattgtagagtcaagagatagattgcttagggctctacgc tctatgaatgctggggatgctgctgatcaagtaatccgccaagttgataaaatgctaaaa tacaatgagcgggcttcacgtgatgctcggtctggaaaggatgatcaccagtcaagccaa ctgcctgtttcaggggacctggtaagaaaaagaccttcacctcttgatgttgaagagtca gctaatggtcatgagataccttccaagcgaagtcgttatactcatgaagcctattcaaca ttgccagttcaaaagaatgattctgggtgggatacaacttctgtaaatggagtgtcctct gagcttcctatgctagatggtgaggtgactcctgtggagcaaatgattactgtaattggt gcattgcttgctgaaggagaaagaggtgctgaatcacttgaaattcttgtttcgacaatc catcctgatctgttggccgatattgtaataacgaatatgaggcacttgccgaagatgccg ccacccttagcaaggccagggctgccagttgctcggcagataggttctttaagtagttcg gcacaagttatctcagagtctccaacatcatctgtgcagtctccagttttggctgcccaa atgtctttttcttcagcaactgttaacagcttatcagttgctgatacttccaatgtgaat aatcttcccgctgattccaagcgtgacccacgaagggatcctcgtcgccttgatccacgg agtatagcagtttctgctgaactggcatcctctcccgctgtagaggatactacttctatg caatctgacatcgatggttcagtttccttaaataagcttaattcacatccgattttgacc actgttgaatctactttagtaactcccaatcccaaaacagaaagtgatggtatgattttg gatggtcaattggtttctggaactgaccaaccaactcccatggatgagattctggatgga cctgtcgaagatgaccctactttgaaggtgaatgtatcttcagatctaacagattctcgt gtgcaaactgatgaggaccttgaagcaatgccattatcagatgttggattagcagatgat gattataccacatcttttatagaatctgatcagcgttctcctgccctttcaaacacatct gaagagatatgtcaggacctgcctgatgttcccatatatattgagttgacacaagagcag aaacaaagactagggcatatggctgttgagcgaattattcaatcatacaagcatttgcac ggaacagattatagtcagatgcgcttggcattactagctcgattggttgctcagattgat gtggatgatgaaattattgtgatgctgcataaacatatagttgtggattaccaacagaaa aaggggcatgagctagtattgcatatcttgtaccatctggaagctctggctctgtccgaa tcagttgaaagctccacatttgctgttatgtatgaaaagttcctcctggcagtggctaag tgtttgctggagtcctttccagcttcagacaagtcatttagtagacttcttggcgaagtt ccagtcctgcccaactccactttgaaactactagatgatctctgctattctgatgttatt gatcaacatggaaaagatgttagggacactgaacgtgtcactcagggacttggtgctgtc tggagtttaattctagggcggccacaatatcgacaaagctgcttagacatcactttgaag tgtgctgttcatccacaagatgacatccgcaccagaggtgtccgactggtggcaaacaaa ctctatcagttgagttacatatcagaagttattgaaaaatttgcgacagatatgttgttg tctgctgttgaacagcctacatcaggtatagagcattcacaatcggagtccacagggcga aaaactgatggaacgttgggaagccaagaaacatcagttaatcatgtgcaaaatttggag ttcgcaaattctgaaaatgattccataacgaaggaacgaccagtgtcaatgatgtcaatt cctgaagttcagcgactcatttctttgttttttgctttatgtacaaagaaacctagtctt attcaacttgtatttaatacttacgggtgtgccccacaagctgtaaagcaggcgtttgat cgcaatattcctgttcttataagggccctagggtcgtcaaatacagatttgcttcacatc atatctgatcctccgcaaggaagtgaaaaccttttgatgttggtgctgcaacaattgact caagagagaacaccatcgtctgatctgataggcactgttaaacatttgtatgaaactaaa ttaaaggatgtcacaattctcattccaatgttgtcttcacttactaaaaatgaggtttta cctatattccctcggcttgttgcccttccattagaaaaattccagactgcacttgctcac atactccagggttcagctcatacaggtccagctttgactcctgcagaagtgttggtttcc atccacaatattgttcccgacaaagaaggcctcacacttaagaagataacagatgtttgc tcagcttgttttgagcagcgcacagttttcacgcagcaggtcttggcaaaggctttgaat cagatggttgatcaaactcccattcctcttctctttatgagaacagttattcaggcaatt gatgcctttccttcattggttgattttgttatggaaatactttctaaactcgtaaggaaa caggtttggagaatgccaaagctttgggtagggttcttgaaatgtgcttctcaaacccag ccacattctttccatgtattgttgcagttgccacccccacaactcgaaagtgctttgaac aagtatgcgaatgtcaaaggtcccctcgctgcatatgctagccaggctagtataaaagct tcgctctctagaccaacacttgcagttcttggtcttgcaaatgaaccgcatttgcaccaa tcgcatttgtcatcaccaccgtttcaccctacagatgcaacttcatcaactccaacatga

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