Fragaria vesca (woodland strawberry): 101303727
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Entry
101303727 CDS
T02666
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04120
Ubiquitin mediated proteolysis
fve04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101303727
04120 Ubiquitin mediated proteolysis
101303727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101303727
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101303727
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
U-box type E3
101303727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
101303727
NCBI-ProteinID:
XP_004304262
LinkDB
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Position
LG6:31397072..31402662
Genome browser
AA seq
1031 aa
AA seq
DB search
MATPKPQRSKEEVEDIILRKIFQVTLTEPPPDPNSRVVYLEMTAAELLSENKPMRLTRDL
LESILIDRLMGGGGGAAAAEPPFQYLVGCYRRAYEESRKITAMKDKNLRSDMESVIRQAK
KLSVSYCRIHLGNPESFPGSGSDPGTASPLLPLIFSEVGGTMDEFGGSSSSGVQCPPGFL
DEFFRDSDFDSLDPILRGLYEELREIVLKVSALGNFQQPLRALLYLVSFPVGAKSLVNHP
WWIPKGVYLNGRVIERTSILGPFFHVSALPDTPIFKSQPDVGQQCFPENSSDSGLRSSYS
TIKTMMNNLYAGLHELLHTLLKNPETRESVLEYLAEVINKNSSRAHIQVDPLSCASSGMF
VTLSAVMLRLCEPFLDANSSKRDKIDPKYVFYGNRLELRGLTALHASSEEVTEWINEDRL
GNAGGDGQNRLSQSQQATSSGSNISQPSNLKPTGEKIKYTFICECFFMTARVLNLGLLKA
FSDYKHLVQDMQRNEDTLKALKKQAPSPGMNNDIARLEKEIELCKQEKRCYEAQILTDEP
LLERALSFYRLMVVWLVRLVGGFKMPLPSSCPVEFASMPEHFVEDAMELLIFASRMPKAF
QGILLDEFMNFIIMFMASPEYIRNPYLRAKMVEVLNCLMPRPSHQPASVTAAAASLFEGH
QLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWKQIARE
EEKGVYLNFLNFLINDSIYLLDESLNKILEHKELEAEMSNTAEWESRPAQERQERTRLFQ
SQENIIRIDMKLANEDVSMLAFTTEQITAPFLLAEMVERVASMLNYFLLQLVGPQRKSLS
LKDPEKYEFRPKQLLKQIVYIYVHLARGDTENIFPAAISKDGRSYNEQLFGAAADVLRRI
GEDGRVIQEFVELGAKAKVSASEAMDAEAVLGDIPDEFLDPIQYTLMKDPVILPSSRITV
DRPVIQRHLLSDNSDPFNRSHLTADMLIPDNELKAKIQEFIRSQESKRGESLGMQSDKAT
IQTTSSEMLID
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccaaaaccccagaggtctaaggaggaggtggaggacataatcctccgcaaa
atcttccaggtcacgctgacggagccaccgccggatcccaactcccgagtcgtctacttg
gagatgacggcagcggagcttctcagcgagaacaagccgatgaggctcacgcgcgacctc
ttggagtcgatccttatcgaccgcctcatgggcggcggtggcggcgccgcggcggcggag
ccaccgttccagtatctcgtcgggtgttaccgacgcgcctacgaggagagtaggaagatc
accgccatgaaagataagaacttgaggtcggatatggagtctgtgattagacaagcgaag
aagctttctgtttcgtattgtaggatccatttgggtaacccggagtcgtttccgggttcg
ggttcggatccgggtacggcgtcgcctttactgccgttgattttcagtgaagtgggaggc
acaatggatgagtttggagggagtagtagtagtggggtgcaatgcccacctgggtttttg
gatgagttctttagggactcggatttcgatagcttggacccgattttgaggggattgtat
gaggagttgagggagattgtgcttaaggtttcggcattggggaatttccagcagccattg
agggccttgttgtatttggttagctttccggtgggggcaaagagtttggtgaatcaccct
tggtggattccgaaaggggtttacttgaatgggagggttatagagaggactagtattttg
ggtcctttttttcatgttagtgcattgcctgatactccaattttcaagagccagcctgat
gtggggcagcagtgctttccagaaaattcaagtgatagtggtctgcgatcttcatacagc
acgattaagacaatgatgaataatttatatgccggcctccatgaacttctccacacactt
ttaaaaaatccagaaactcgtgagagtgttcttgagtatcttgctgaggttatcaacaag
aactcatcaagggctcatattcaggtcgatcctctttcttgtgcaagttctggcatgttt
gttactctcagtgctgttatgcttcgactttgtgagccatttctggatgcaaattcaagt
aaaagggacaaaatcgatccgaaatatgtattctatggtaaccgtctagagttaagaggt
ttgactgccctacatgcatcatctgaagaagttacggaatggattaatgaagataggctg
gggaatgctggtggtgatggtcaaaatcgactttcacaatcccaacaagccaccagttct
ggcagtaacatatctcaaccttctaacctgaagccgaccggtgaaaaaattaaatataca
tttatttgtgaatgcttcttcatgactgcgagggtactcaatctgggtttattgaaagca
ttttctgactataagcatctagtacaggacatgcagaggaatgaagatacacttaaagcc
ttgaaaaagcaggcaccttctcctggaatgaataatgatatagctcgccttgagaaagag
atagagttgtgtaaacaagaaaagcgttgttatgaagctcagatactaacggatgaacca
ctcttagagcgtgctctttctttctaccggttgatggtggtatggctagttcgcttggtt
ggtggatttaaaatgcctctgccatcatcttgccctgtggaatttgcatctatgccagaa
cattttgtggaagatgccatggagttgcttatatttgcttcgcggatgccaaaagcattt
caagggatcttattggatgaatttatgaacttcattataatgttcatggcaagtccagaa
tatatcaggaacccttatctaagagcaaagatggttgaagtcctgaactgcttgatgccc
cgtccaagtcatcaaccagcttctgttacagctgctgctgctagcctgttcgaagggcac
caactgtctcttgagtatcttgtgaggaatctcttgaaactatatgtcgacattgagttc
actggttctcatacacagttttatgacaagtttaacatccgccataatattgccgaactt
ctcgaatatctttggcaagtccccagtcatcgaaatgcttggaaacagattgctagggaa
gaggagaaaggcgtatatttgaatttcttgaacttcttgatcaatgatagtatatatctt
ctggatgaaagtcttaacaagattcttgaacacaaagaactggaggctgagatgtcgaat
actgcagaatgggagagtagacctgctcaagagaggcaggagagaacccgcctgttccaa
tctcaagaaaatatcatccgaattgatatgaagttggcaaatgaagatgtgagcatgttg
gcatttactacagaacaaattacagctcctttcctacttgctgagatggtcgaaagggtg
gcaagcatgctcaattactttttgttgcaattagtaggtcctcaaagaaaatctcttagc
ctaaaagacccggaaaagtatgaattccgtccaaagcaattgcttaagcagattgtgtac
atctatgttcatctagcaagaggcgatacagaaaatatcttcccagctgccatctcaaag
gatggtcgatcttacaatgagcagttgtttggtgctgctgcggatgtcctaagaagaatc
ggtgaagatgggagggtcatacaggagtttgtggagcttggtgccaaagccaaggtttct
gcttctgaggccatggacgctgaagctgttctaggggatattccagatgaattccttgac
ccaattcagtacactttaatgaaggatccagttatcttaccttcttcaagaatcactgta
gaccggcctgtcattcaaaggcatcttcttagtgataatagtgatccattcaaccgttcc
catcttactgcggacatgttgatacctgataatgaattgaaggcaaaaatacaagagttc
attaggtcacaggagtctaagcgtggggaaagcctaggcatgcagagtgacaaggcaaca
atacaaaccacatctagtgaaatgctaattgattag
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integrated database retrieval system
