Fragaria vesca (woodland strawberry): 101303858
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Entry
101303858 CDS
T02666
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101303858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fve02000
]
101303858
Transporters [BR:
fve02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
101303858
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_21
AAA_16
AAA_5
AAA_29
AAA_30
Zeta_toxin
AAA_25
AAA_28
AAA_15
Motif
Other DBs
NCBI-GeneID:
101303858
NCBI-ProteinID:
XP_004308120
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All DBs
Position
LG7:22882732..22887369
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AA seq
705 aa
AA seq
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MTSVTLSLPLTPVSTRLRTTDSRLASLYQPLRQSYSFPRFSLHRLPNLTPASAYVSGPAS
DPIVTEPDPKFDEPDSKLQPPSVISWGLLWSLLLKHKLRLAISTFALVGCSACTLSMPIF
SGRFFEVLIGKRTEALWTLLSKVGVLYALEPILTVVFVVNMNTVWEKVMSTLRAQIFGRV
LIQKVEFFDRYKVGELTGLLTSDLGSLKNVVSENISRDRGFRALTEVTGTMCILFVLAPQ
LAPILGVLMLTVSVLVALYKRSTVPVFKAHGMAQAFIADCVTETFSAIRTVRSFGGEKRQ
MLMFGKQVLAYQSSGIKLGVFKSINESLTRVVVYISLLALYALGGSKVKAGELSVGTVAS
FIGYTFTLTFAVQGLVNTFGDLRGTFAAVERINSVLSGVEIDEALAYGLEKEMQQNKLLD
ENYRLFLIDGSYEKNQSVNTHYMSALKSASNVGRLAWSGDVCLEDVHFSYPLRPDVEILN
GLNLTLKCGTVTALVGSSGAGKSTVVQLLARFYEPTTGRITVGGEDVRTFDKSEWARVVS
IVNQEPVLFSVSVGENIAYGLPDDHVSKDDVIKAAKAANAHEFIISLPQGYDTLVGERGG
LLSGGQRQRIAIARALLKNSPILILDEATSALDAVSERLVQDALNHLMKRRTTLVIAHRL
STVQNAHQIALCSEGKITELGTHSELLAKKGQYASLVGTQRLAFE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgtcacgctctccctcccactcactcccgtctccacgcgcctccgcacaacc
gattcccgactcgcctccctctaccaacctctccgccaatcatactccttcccgcgcttc
tcactccaccgcctccctaacctcacccccgcctccgcctacgtgtccggacccgcctcc
gacccgattgtcaccgagcccgacccgaagttcgacgagccggactccaagctccagccg
ccgagtgtgattagctgggggttactctggagccttctcctgaagcacaagctcagactg
gcaatttccacttttgccctcgtcggctgcagcgcctgcactctttcaatgccgatattt
tcaggacggtttttcgaagttctgatagggaagagaacagaggcattgtggacattgctg
agtaaagtcggagttttgtatgcgttggagccgattttaactgttgttttcgttgtcaat
atgaatactgtatgggaaaaggtcatgtccacgcttagagctcaaattttcggcagggtt
ttgattcagaaggtcgagttttttgatcgttacaaggttggtgaactgacgggattgtta
acatctgatttgggttctctgaaaaatgttgtgagtgaaaacatttcaagggaccgcgga
ttcagggcacttactgaggttactgggacaatgtgcatactctttgttttggctccccaa
cttgcaccgatccttggggttctgatgctcaccgtttctgttttagttgctttgtacaag
agatcaactgtacctgttttcaaggcgcatggaatggctcaagcattcatagctgattgt
gtgacagaaactttttctgcaatacgtactgtaagatcctttggtggggaaaagcgccaa
atgctaatgtttggtaaacaggtgctagcttaccagagcagtggaataaagcttggggtt
ttcaaatccataaatgaatcgttgactagagttgttgtgtatatatctcttttggcctta
tatgctcttggaggaagcaaagtgaaggcgggtgaactctctgttggaactgtggcttct
tttattggttatactttcacattaacattcgcggttcaaggcctggttaatacatttgga
gatcttcgtggaacttttgctgcagtggagaggattaactctgttttatcaggggtagaa
atcgatgaagcccttgcttatggcttagaaaaggaaatgcaacaaaataaattacttgat
gaaaattacagattgttcctcatcgatggttcctatgagaaaaatcagtctgtaaatacg
cattacatgtcagctctgaaatcagctagcaatgttggacgcttagcttggtctggcgat
gtttgtcttgaagatgtgcatttctcttatcctttgagacctgatgtagaaattctgaat
ggtctaaatctaacgctaaagtgtggaactgtaactgctctagttggttccagcggtgct
ggaaaaagtactgttgtacagctattggcacgtttctatgagccaactacaggtcgtata
acagttggaggagaggatgtccggacatttgacaagagtgaatgggcacgagtcgtgtca
atagtgaatcaggaacccgttcttttctcggtatcagttggtgaaaatattgcatatggg
cttccagatgatcatgtatccaaggatgatgtgataaaggctgcaaaagctgcaaatgct
catgaattcataatttcacttccacagggttatgatacactagttggtgaacgtggaggg
ctacttagtggtggccagagacagagaattgctattgcaagagcactgcttaagaattcc
ccaatccttatacttgatgaggccaccagtgcattggatgcagttagtgagcgcctagtc
caagatgcgttgaatcatctaatgaaacggcggacaacgttggtgattgctcaccggtta
agcacagtccaaaatgcccatcaaattgcattgtgctccgagggtaagataactgagctt
gggacacactctgaactattggccaagaaaggtcaatatgcttcattggttggcactcaa
agacttgcatttgagtga
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