Fragaria vesca (woodland strawberry): 101303919 Help Entry 101303919         CDS       T02666                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism fve  Fragaria vesca (woodland strawberry) Pathway fve03018   RNA degradation Brite KEGG Orthology (KO) [BR:fve00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     101303919  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fve03019]     101303919 Messenger RNA biogenesis [BR:fve03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      101303919   mRNA degradation factors    5'-3' decay     Decapping complex      101303919 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  101303919 NCBI-ProteinID:  XP_004303935 LinkDB All DBs Position LG6:complement(27807308..27813244) Genome browser AA seq 806 aa AA seqDB search MERSGSGGGADFRDLLRSSSENNALFDASQYEFFGQNVAEEVELGGLDDENDRKSLFGSV DNEYHLFEKDEGLGLGSLSDVDDLATTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSAT DWAQDGDFGSWLDQQMFDTDNSLDGKRWSSQPQSSARFPESKPLHRTSSYPEQPPPVLQH YNSEPIIVPKSAFTSFPPPGNRSQGGSPQHLSLSTLSGASQSPFSSPSLSLSNSNLHLAG GLPHGLHYGANMPQFTNPALSFNSRSQNNWVNHAGVLHGDHSNLLNNILQQQLPHQNGLL SAQLLSAQQQLQQQRLHRPVPPSLAHFAAMQSQLYNTHPSPSHKPMHGLPDIREHRPKHR GKHNRFSQGSDTGSQKSESGFIQFRSKHMTSEEIESILKMQHAATHSNDPYIDDYYHQAS LSKKAAGSRSKNSFCPSHLREFSSRGRNSSDQHSHSSVDSLGRIPLSSIRRPRPLLEVDP PPGEGNSEHASEKPLEQEPMLAARITIEDGLCLLLDVDDIDRLIQCGQPQDGGVQLRRRR QMLLEGLAASLQLVDPLGKGSHAVGLSPKDDLVFLRLVALPKGRKLLTRFIQLLFHGSEL ARIVCMTVFRHLRFLFGGLPSDPAAADTTTSLAKTVSACISGMDLRALSACLVAVVCSSE QPPLRPLGSPAGDGATIILKSVLERATVLLTDPHAVGNCSVSNRALWQASFDEFFGLLTK YCLSKYETILQSIFTQTQQSSEVIGSEATKAIHREMPVELLRASLPHTNENQRKLLSDFA HRSMPISGLNAHGGSGGQMNSESVRG NT seq 2421 nt NT seq  +upstreamnt  +downstreamnt atggagagatctggtagcggcggcggcgcggatttccgggacttgcttcggagctcctca gagaataatgcactctttgatgcatcacagtatgagtttttcggccaaaacgtggcggaa gaagttgagttggggggtttagacgatgagaacgacagaaaatcgttatttgggtccgtt gataatgagtaccatttattcgaaaaggatgagggcctagggttgggatctttatctgat gtggatgatctggcgactacttttgcaaagttgaacaaagttgtaactggacctagacac ccgggcgttattggagatagaggttctggatcattttcacgggaaagttcatctgctact gactgggcccaagatggagatttcggtagctggttggaccagcagatgtttgatacagat aattctctggacggaaaaagatggtcatcacagccacaatcttccgctcgatttccagaa tcaaaacctttgcacagaacatcctcataccctgagcagccccctcctgtcctacagcac tacaacagtgaaccaattatagttcccaaatcagctttcacatcattccctccccctgga aataggtcccaggggggatcaccacagcatctgagtctttctactctatctggtgcttcc cagtcgcctttttcttcaccaagtctttctttatctaactctaatcttcatctggctggt ggtttacctcatgggttgcattatggagcgaacatgcctcagttcacaaaccctgccctt tctttcaatagcaggtcacaaaataattgggtcaaccatgctggagtattgcatggggat cattccaacctcttgaacaatatattgcagcaacagctacctcatcaaaatggacttttg tccgcacagttactatcagctcagcagcagctacaacagcagagattgcaccgaccggtc ccgccatctttggcccattttgcagcaatgcagtctcaactatataatacccatccttcg ccctcacacaagccaatgcacggattgcctgacataagagagcatagacctaaacataga ggtaaacacaatcggttttctcaaggctctgatactggtagtcagaaaagtgagagtggg tttatccagttcaggtctaagcatatgacatccgaagagatagagagtattcttaaaatg caacatgctgcaacacatagcaacgacccctacatagatgattattaccaccaggcaagt ctttccaagaaagctgctgggtcgaggtcaaaaaactctttctgcccatctcatctgagg gagttctcttccagaggtcgtaatagtagtgatcagcattctcattcttctgttgattct cttgggaggattcctctctcatccatccgtaggccacgtcctctccttgaagttgatccc cctcctggtgaaggcaattctgaacatgcctctgagaagcctttggaacaggaaccaatg cttgctgctaggataaccattgaagatggcctttgtctccttcttgatgttgatgatatt gatcgacttatacaatgcggtcagccccaagacggtggagttcaacttcggcgaaggcgg caaatgctgctggaagggttggcggcgtcacttcagcttgtagatccacttgggaaaggc agtcatgcagttgggttgtccccaaaggatgaccttgtgttcctaaggttggttgctctt cctaaaggccgaaagctccttactaggtttatccagcttcttttccatggtagtgagctt gcccgaattgtctgcatgactgtattccggcacttaagatttttgtttggaggtcttcca tctgatcctgcagctgctgatacaactaccagtcttgcaaaaacggtttctgcatgtata agtggtatggatcttcgtgctctaagtgcctgccttgttgcagtcgtttgttcatcagag cagccacctcttcgtccccttggaagccctgctggagatggggccactattatattgaaa tctgttcttgaaagggcaactgtactcttaactgatcctcatgctgttggaaactgtagt gtttctaatcgtgccctctggcaggcttccttcgatgaattctttggtcttcttaccaaa tattgtttgagtaaatatgaaactatcctgcagtcaatatttacgcagacccagcaaagt tcagaagttattggttcagaggccaccaaggcaatacaccgggaaatgcctgtggagctt ctacgtgccagtcttcctcacactaatgagaaccaacgcaagcttttgtcagattttgct catcgttccatgcccatttctggtcttaatgctcatggtggcagtgggggtcaaatgaac tctgaatcagtaaggggatag

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