Fragaria vesca (woodland strawberry): 101304015
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Entry
101304015 CDS
T02666
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase 1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101304015
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101304015
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101304015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3HC4_3
zf-C3HC4
DUF2921
zf-ANAPC11
PHD_NSD
zf-RING_UBOX
zf_RING_Vps8
zf-RING_16
zf-P11
Motif
Other DBs
NCBI-GeneID:
101304015
NCBI-ProteinID:
XP_004303099
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Position
LG6:15018419..15027790
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AA seq
562 aa
AA seq
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MGTLRKLGLRFLYCFFFCAAASLLLSPPPVAALRPLRERARSWGDEWLFVRKDENELGPF
STWNITGTYRGTWKFPDSANRSSRFPEFRKSSGNSVIELVSTQTKITGVHYVQGVIIFHD
VFDNEHNVGGVKIRVEGVFIWPFRQLRMVANSGKEGDSSQEEDYILSNPYHMLGAFSSQV
FQESPRDKLWKKKHSPIYEMEKHCNIEIAGQISRVSSAHNDGDRDRYQIEGLMESPAVDD
DGDCFSPLILNATSINVEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSI
LMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPT
NSGEGWETMRRELSVLYSRFYGILLGGILVMYEFHNFLRPILLLMYSFWIPQIITNVIRD
SRKPLHPHYILGMTVTRLAIPLYIFGCPNNFMRIEPDKSWCICLSLFLGLQASILLLQHY
LGSRWFIPRQILPEKYSYHRRPDQDTNHATDCVICMTGIDLTLRSDDCMVTPCDHFFHSG
CLQRWMDIKMECPTCRRPLPPA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgggcactctgaggaaattagggttgaggtttctctactgcttcttcttctgtgctgct
gcttcgctgctgctttctcctcctccggtggcggccctcagacccttgagggaaagggct
cgctcctggggcgatgagtggctatttgtaagaaaagatgaaaatgagttgggaccattt
tctacgtggaacataacaggaacttatagagggacttggaagtttcctgattctgctaat
agatcttccagattcccggaatttaggaaatccagtggcaattctgtcatcgaattagtt
agcacacaaacaaaaataacaggtgtacattatgtgcagggtgtgattatcttccatgat
gtgtttgacaatgaacacaatgttggtggtgtcaaaattagagtggaaggtgtatttata
tggccgtttagacagcttcgaatggtagctaatagtgggaaagagggagactcaagccaa
gaagaagattatattttatcaaacccgtatcatatgcttggagctttctcttcccaagtt
tttcaagaatctccacgagataagctatggaagaaaaagcattcgccaatttacgaaatg
gagaaacattgtaatatagaaattgcaggccaaatttcacgtgtatcatctgcccataat
gatggagatcgtgatcgttaccaaatagaaggtttgatggagagtcctgcagtggatgat
gatggagattgcttctcacccttgattttaaatgctacttctatcaacgtggaggtgtac
tataataaagcagtgaactataccttgatggtcacctttatctccttcctacaagttctt
ctcttaattcggcaaatggaacatagcaacactcagtcaggggctgccaaagtgtcgatt
ctaatgattggccaacaggctatcatggacgcttatctttgccttctacacttgacagca
ggaatacttgttgaatccttatttaatgcttttgcaaccgctgcgtttttcaagtttgtt
gtcttctcaatatttgagatgagatatcttcttgctatatggaaagcaagtaggcctaca
aatagcggagaaggatgggagacgatgaggcgtgagctttcagttttatatagccgtttc
tatggaattcttcttggaggcattctggtcatgtatgagttccataacttcctgagacct
attcttctccttatgtactctttttggatacctcaaataatcaccaatgtcatccgtgat
tcaagaaaacccttgcaccctcattacatcctaggcatgactgttactcggctagcaatc
ccgttatacatatttgggtgccctaacaacttcatgcgcattgagcctgacaagagttgg
tgtatatgtttgagtttatttcttggactgcaagcatcaattcttcttctccagcattat
cttggctctcggtggttcattcctcgtcagattctacctgagaaatatagctaccataga
aggcctgatcaggatacaaatcatgccacagattgtgtcatttgcatgactggaattgat
ctcacactgcgttcagatgattgcatggtgacaccatgcgatcatttctttcattcgggt
tgtttacaaaggtggatggatataaagatggagtgtccaacttgtcggcgtccactgccc
cctgcctga
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