Fragaria vesca (woodland strawberry): 101304179
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Entry
101304179 CDS
T02666
Name
(RefSeq) chloride channel protein CLC-d
KO
K05016
chloride channel 7
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
101304179
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101304179
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101304179
Protein phosphatases and associated proteins [BR:
fve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101304179
Membrane trafficking [BR:
fve04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
101304179
Ion channels [BR:
fve04040
]
Chloride channels
Chloride channel (CLC)
101304179
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
101304179
NCBI-ProteinID:
XP_004296904
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All DBs
Position
LG4:complement(12225448..12232730)
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AA seq
794 aa
AA seq
DB search
MLSNHLQNGIIDAPKLAWSRLPNSEDAENDVVGLRKKGDEGGGVESLDYEVIENYAYWEE
QAQRGKLYVGYYVAVKWFFALLIGIGTGLAAVFINISVENFAGWKFALTFAIIQKSYFAG
FVVYVLINLVLVFSSVYIITQFAPAAAGSGIPEIKGYLNGVDIHGVLLFRTLIGKIFGSI
GSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRYRWLQIFNSDRDRRDLVTCGCAA
GVSAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGS
GGFIIWDISDGQEDYSFEEFLPMAVIGVIGGLLGALFNQLTFYIAHWRRNYLHKKGNRVK
IIEACLISLITSIISFGLPLLRKCSQCPEADPDSGIECPRPPGTYGNYVNFFCSKDNEYN
DLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIM
IGSTYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRITVSLCVIMVEITNNLKFL
PLIMLVLLISKAVGDAFNEGLYEEQSRLRSIPQLESKPKYQMRKMTAKEACGKRVISFPR
VVKVADLVSILRSNIHNGYPVIDHSRNGETLVIGLMLRSHLLVLLQSKVDFQHSPLPCDP
RNARSIRHTLSEFVKPASSKGLSINDIHLSSDDLEMYIDLAPFLNPSPYLVPEDMSLTKV
YNLFRQLGLRHILVVPRPSRVIGLITRKDLLIEENEDSASMELQSTSVRAQHCDKRKVKW
IGDMERPLLTGLLS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgaatcacttgcagaatgggatcatcgacgcgccgaagctggcctggtctcgc
ttaccgaactcggaagacgccgagaacgacgtcgttggattgaggaagaaaggcgacgaa
ggcggcggcgtcgagagccttgactatgaagtcatcgagaactacgcttattgggaagag
caggcgcagagagggaagctttatgttggatattatgtggctgtgaagtggttctttgct
ttgcttatcggaatcggtactggattagctgctgttttcatcaatatttcggttgagaac
tttgcaggctggaaatttgcactgacatttgctataatacaaaaatcgtattttgccggt
ttcgtggtgtacgtattaatcaacttagttttggtcttttcctctgtatatatcattaca
caattcgcaccggcagcagctgggtctggtattccagaaatcaaggggtatttaaatggg
gttgacatacacggtgtcctactgttcagaacattgatcggaaagatatttgggagcatt
ggttcagtgggaggtggtctagctttaggcaaagaaggtcctcttgttcatactggtgct
tgtattgcttcgttgcttggacaaggtggatctacaaaataccatctcaggtacaggtgg
ctacaaatttttaatagtgatcgagatcgccgtgatcttgtaacctgtggatgtgcagct
ggagtctctgctgctttcagagctcctgttggtggtgtactatttgcactggaagaagtt
acatcttggtggaggagtcaacttatgtggcgtgtatttttcacttctgcaattgtggct
gttgtggtgcgtactgcaatgggatggtgcaagagtggaaaatgtggacattttggctca
ggtggcttcataatatgggatatatcagatggtcaagaggactattcttttgaggaattc
ttgccaatggcggttattggggtcattggaggtttactgggagccttgtttaatcagctt
acattttacattgctcactggcgccgaaattatttacacaagaaagggaatcgagtaaag
ataattgaagcgtgtctcatctctctgataacgtcaattatttcctttggtttaccactc
ttaagaaaatgtagtcaatgccctgaagcagatccagattctggtattgagtgcccgcgg
cctccaggaacgtatggaaattatgttaattttttttgcagcaaggacaatgaatacaat
gatcttgcaactattttcttcaatacacaggatgatgctatcaggaatttgtttagtgca
aaaacaatacacgagtacagcgcccaaagtttattgaccttcttggttatgttttataca
ttagcagttgtgacatttggtactgccgttccagctggtcaatttgttcctggaataatg
ataggatcaacatatggacgtcttgtaggcatgtttgttgtcaacttctacaagaagctc
aacattgaagaggggacatatgcactactcggggcagcttcttttcttggaggttcaatg
cgaatcacagtgtctctatgtgtcattatggttgaaatcacaaataatctgaaatttttg
cctcttatcatgcttgttcttcttatttcaaaggctgttggtgatgcattcaatgaaggc
ctgtatgaagaacagtcacggttgagaagcattccgcaattagaatcgaaacccaaatat
caaatgcggaagatgacagctaaggaagcctgtggaaaaagggtgatctccttccctcgt
gttgtgaaggttgcagatttggtttctattctacggagcaacatccataatggctaccct
gtgattgatcattctagaaatggagaaacacttgtcattggactaatgcttcgtagtcac
ttgttggtacttctgcagtcgaaggtagatttccagcatagccctttgccatgtgatccc
agaaatgctaggtctatcaggcacactttgagcgagtttgttaaacctgcttccagtaaa
ggattatctataaatgatatacatctgagctcagacgacttggaaatgtacatagatctc
gccccctttctaaacccatctccttacctcgtccctgaggatatgtctttgacaaaggta
tataatcttttccgtcagttaggtctgagacatatacttgttgttccccggccatctcgt
gtgattggtttgattaccagaaaggatttattgattgaggagaatgaggattctgcttca
atggaactccaatcgactagtgtaagagcacaacattgtgataagagaaaggtcaagtgg
attggagatatggagcgcccgctactcactggtcttctttcgtga
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