Fragaria vesca (woodland strawberry): 101304257
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Entry
101304257 CDS
T02666
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101304257
03036 Chromosome and associated proteins [BR:
fve03036
]
101304257
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101304257
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101304257
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101304257
microRNA pathway
RISC loading complex
101304257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
101304257
NCBI-ProteinID:
XP_004294050
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All DBs
Position
LG3:complement(9139517..9145419)
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AA seq
954 aa
AA seq
DB search
MSNRGGPTGGRGGGGRGRGRANPGGPARGAYSPASAPSPAYAPAPAPPAHTERPAVATPS
VSPTPAPVASSSSSSAASLASEMDKKLTLAAVELPPSSDKAVRFPARPQFGTVGKRIQVR
ANHFLVDIAERDLHHYDVSISPEVASKKTNRDIISQLVKMYAESHMGKRMPAYDGMKSIY
TAGSLPFTSKEFMVKLPEREGRAGPATKRKDREFKVSIKLANKPDLYQLQQFLLRKHHET
PQETIQVLDVVLRAAPSLKYCVVGRSFFDPDLGRKGELGSGLEYWRGFYQSLRPTQFGLS
LNIDISARAFYEPILVTEFVKKHFGYNDLSRGLSDRDCLKLKKNLKGIKVTLSSGGGRSY
RITGVTLQPLSKLTFTLEDNQTKLFVVQYYHEKYGINLTQVALPALQSGNDSRPVYLPME
LCLIVPGQRYTRRLSENQVTNMLRATCQRPMERESNIQQMVKRNNYNGERLVNNEFGIKV
NEQMALVDARVLPSPMLKYHQSMDTPKMGAWNMINKKMVNGANIDFWAYVNFSRLRPDFN
DCFLNDLINMCGSKGIVFNPEPLVPVQSAHPSKIERVLRDIHKQSVQRLNEMGQSSKHLQ
LLIIILPDVKGSYGPIKTICETELGIVSQCCNPKQAQKLNKQYLENLSLKINVKVGGRNT
VLNDAILRRIPLVSDRPTIIIGADVTHPQAGEDSSPSIAAVVASMDWPEVSKYRGILSAQ
NHRQEIIQDLYKQTHDEKRGLVHSGMIRELFIAFRRSTGQKPHRIIFYRDGVSEGQFSQV
LLYEMDAIRKACASLEEGYLPPVTFIVVQKRHHTRLFPVDRNTDRSGNIQPGTVVDTKIC
HPTEFDFYLNSHAGIQGTSRPTHYHVLFDENKFTADQLQTLTNNLCYTYARCTRSVSIVP
PAYYAHLAAFRARYYIEGDNSDGASVGRGSGGSAAQSQVLPAVHEFVKDVMFFC
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcgcggcggtccaaccggtggtcgcggcggcggaggccgcggccgtggaaga
gcaaaccccggcggtcccgccagaggggcgtattctccagcttctgcgccttctccggcg
tatgctccagctccggcaccgccggctcacactgagcggcctgctgtagcgacgccgagc
gtgtctccaactccggctccggtagccagctcatcctcatcgtcagctgcatcgctggcg
agtgagatggacaagaagctcacattagctgcggtggagctacctccgtcgtcggacaag
gctgtgaggtttccggcgaggccgcagtttggtaccgtcggtaagagaattcaagtccga
gccaatcactttttggtggatattgcagagagagatctgcatcactatgatgtttcaatc
agccctgaagtcgcatcgaagaagacgaacagagatattatcagtcagctggttaagatg
tacgctgagtctcacatggggaagaggatgccagcatatgacggcatgaagagtatctat
actgctggttcacttccctttacttcaaaagagtttatggtcaagctacctgagagagaa
ggccgagctggacctgcaacaaagaggaaagatagagagttcaaggtctctattaaattg
gcaaacaagcctgacctgtatcaattacagcagttcttactgaggaaacaccacgaaaca
ccacaagagactatccaagttcttgatgttgttctcagagctgcaccgtctctgaaatac
tgtgttgttggtaggtctttttttgaccctgatctgggtcgcaaaggtgagcttggttct
ggcttggaatactggagaggcttttaccaaagcctaaggcccactcagtttggtctatca
ctgaacattgatatctcagcaagggctttttatgagcctattctggtgacagagtttgtc
aagaaacattttggctacaatgatctctcaaggggtctatcagatcgtgattgccttaag
ctgaagaaaaacctgaaaggaattaaggttacactgagcagtggtggtggcaggagttat
cgaattaccggggtcactttacagccactaagcaagttgacgttcactctggaggataat
caaaccaaattatttgtggttcaatattatcatgagaagtacggtattaacctaacacag
gtggctctgcctgcccttcaatctggaaatgattcaagacctgtgtatcttcccatggag
ctgtgtttaattgtaccagggcagagatacacaaggagacttagtgaaaaccaagtaaca
aacatgctgagagcaacttgccaacgaccaatggaaagggaatccaatattcagcagatg
gtgaagcgaaataattacaacggagagcgtcttgtaaacaatgaatttggaataaaagtg
aatgaacaaatggcactggtggatgctagagtattaccatctccaatgctaaagtaccat
caatcaatggatactcccaagatgggtgcatggaacatgattaacaagaaaatggttaat
ggtgccaatatcgatttctgggcgtatgtcaatttctctagacttcgtcccgactttaat
gactgctttcttaatgatctcatcaatatgtgcggcagtaaaggaattgtattcaatccc
gagcctctagtcccagtacagtctgctcatcctagcaaaattgagagggttctcagagat
atccacaagcagtctgtccagagactaaatgagatgggacaaagcagcaaacatcttcag
ttgttgatcatcattttgcctgatgtcaaaggatcttatggtcccattaaaacaatctgt
gaaacagagcttggaattgtttcccagtgctgtaaccctaagcaagcacagaagcttaat
aagcagtaccttgaaaatctgtctcttaaaattaatgttaaggttggtggcagaaacact
gtcttaaatgatgccattctgaggaggattcctctcgtcagtgatcgtcctacaatcatc
attggtgctgatgtcacacatccacaagcgggggaagacagtagtccatccatagcagca
gtcgttgcctcaatggactggcctgaggtctctaagtatagaggaatcttgtcggcacag
aatcatcgtcaagaaatcatccaagatctttacaaacaaactcacgatgaaaagcgaggc
ctggttcattctggaatgatcagggaacttttcattgcattcagaagatcgactggccag
aagccacacagaatcatcttctatagggatggggttagtgagggtcagtttagccaagtt
ctgctctatgagatggatgcgatacggaaggcctgtgcttctttggaggaggggtatttg
ccacctgttacttttattgtggtgcagaaaaggcatcatactcgtctcttccctgttgac
agaaatacagatcggagtgggaacattcaaccaggtactgtggtggataccaaaatatgc
catccaacagaatttgatttctacctcaatagccatgctggaattcagggaacaagtcgc
ccaacacattatcatgtactgtttgatgagaacaagttcactgctgatcagttgcagact
ctcaccaacaatctgtgctacacatatgcaaggtgcacccgctcagtttccatagtacct
ccggcctattatgcccatcttgctgcattcagagcacgctattacattgagggcgataat
tcagatggtgcttcagttggcagaggcagcgggggtagtgctgcacagagccaggttctt
ccggctgtgcatgagtttgtcaaggatgtgatgtttttctgttga
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