Fragaria vesca (woodland strawberry): 101304272
Help
Entry
101304272 CDS
T02666
Name
(RefSeq) sm-like protein LSM6A
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03018
RNA degradation
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101304272
09123 Folding, sorting and degradation
03018 RNA degradation
101304272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101304272
03041 Spliceosome [BR:
fve03041
]
101304272
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101304272
mRNA degradation factors
5'-3' decay
Lsm complex
101304272
Spliceosome [BR:
fve03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101304272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
101304272
NCBI-ProteinID:
XP_004296749
LinkDB
All DBs
Position
LG4:9402386..9405461
Genome browser
AA seq
92 aa
AA seq
DB search
MCGAGAERGSRTTKTPADFLKSIQGRLVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV
NGQLKNKYGNAFIRGNNVLYIRTTKMTVADGA
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggagcaggagcagaaagaggatctagaaccacaaaaactccagcagattttctt
aaatcaattcaggggcgactggttgttgttaaactgaattctggtgttgactatcgaggt
atcctggcttgtcttgatgggtatatgaatatagccatggagcaaacggaggaatatgtc
aacggacagctgaaaaacaagtatggtaatgcttttattcgtggaaataatgttctctat
atcagaacaacaaagatgacagtagcagatggagcatag
DBGET
integrated database retrieval system