Fragaria vesca (woodland strawberry): 101304327
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Entry
101304327 CDS
T02666
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101304327
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101304327
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101304327
NCBI-ProteinID:
XP_004307334
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Position
LG7:14543700..14548827
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AA seq
496 aa
AA seq
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MPPTTCILLICLLSSLSSLTLASLNLNLTLPHQHVNPEAVAQEVQRRVNASLSRREMLSL
HDQQCATGNPIDDCWRCSSTNWADNRQQLADCGIGFGADAMGGKGGQIYIVTDSSDRNAA
NPTPGTLRHAVIQTEPLWITFSSDMTIKLKAELIVNSFKTIDGRGHSVHVTGGGCITLQY
VSNVIIHNIHVHHCKPAGNTNVASSPTHVGWRGKSDGDGISLFGARKVWIDHCSLSYCAD
GLIDAIMGSTGITISNNYFAHHDEVMLLGHDDKYLPDSGMQVTIAFNHFGEALVQRMPRC
RRGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYTAPINQNAKEVTKRVDTNEGDWDNW
NWRTEGDIMVNGAFFVPSGAGMSTQYAKASSIEPKSVGLIDRLTVTAGVFGDPRDSSRSE
SYNSGSGTITDGTTNTGSGGYSGGDGDYFGMIFGSSAQPSSSSHPILLSLLIILILYVTT
NHGGLLSLPLFLTLLL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaccacctgcattctcttaatatgcctcttgagctctctctcgtccctcacc
ttagcttccctaaacctcaacctcaccctcccccatcaacacgtcaatcctgaagctgtg
gctcaagaagtacaaaggagagtcaatgcctccctctcccgccgcgaaatgttgtccctc
catgaccagcaatgcgccacgggcaaccccatcgacgactgctggcgctgctcctccacc
aactgggccgacaaccgccagcagctcgccgactgcggcatcggcttcggcgcagacgca
atgggcggcaaaggcggccagatctacatcgtcaccgactcctccgaccgcaacgcggcc
aacccaacacccggcactctccgccacgccgtcatccaaaccgaacccctctggatcacc
ttctcctccgacatgacaatcaaactcaaagccgagctcatcgtcaactccttcaagacc
atcgacggccgcggccactccgtccacgtcaccggcggaggctgcatcaccctccagtac
gtctccaacgtcatcatccacaacatccacgtccaccactgcaagcccgccggcaacacc
aacgtcgcctcctccccgacccacgtcggctggcgcggcaagtccgacggcgacggaatc
tccttattcggcgcgcgtaaagtctggatcgaccactgctccttgtcctactgcgccgac
ggactcatcgacgccataatggggtccaccgggatcacgatttccaacaactattttgcg
caccacgacgaggtgatgctgttgggtcacgacgataagtacttgccggactccgggatg
caggtgacgattgcgttcaatcatttcggggaggcgctggtgcagcgtatgccgaggtgt
aggcgagggtatatacatgtggtgaataatgacttcacgcagtgggagatgtatgcgatt
ggggggagtgcgaatccgacgattaatagtcaggggaatcggtacactgctccgataaac
cagaacgccaaggaggtgacaaagcgcgtggacacgaacgaaggggattgggacaactgg
aactggaggacggagggggacataatggtaaatggagccttcttcgtgccatccggtgcg
ggcatgagcacccagtacgctaaggcctcaagcattgaacccaagtcggtgggtctcatt
gaccgcctcaccgtcaccgccggtgtcttcggcgacccaagggacagtagtaggagcgaa
tcatacaacagcggcagcgggaccataactgatggcaccacaaacaccggcagtggaggg
tacagcggcggtgatggcgactattttggaatgatatttggtagcagtgctcaaccatca
tcatcttcacaccccatcttgttgtctcttctaattatcttaattttgtatgttaccacc
aaccatggtggtctattatcattaccattattcttaacattattattataa
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