Fragaria vesca (woodland strawberry): 101304396
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Entry
101304396 CDS
T02666
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101304396
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
101304396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
101304396
NCBI-ProteinID:
XP_004302858
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All DBs
Position
LG6:complement(10393774..10400653)
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AA seq
693 aa
AA seq
DB search
MASYRPFPPQPAFPPPPPNQNPIAPPPRGNQYNQNWGYNAAAGGDGAAPSSFPQNYIHHP
HGNYGPPRAQHPHPPPQYSYPPPPPPPDSSYPPPPPPQAPPGKNLPLQPPQAPMYYQSNS
QYAQYGHQAMQPPPPPPPPLSPSLAIPPPPPPPNSPPPPPPPKSRESGFDKGPHDKGASK
DVGASAKREHGHSNHHGVPPKHKPPVPLVKKSNGAPGRVETEEERRLRKKREFEKQRQEE
KHRQQAKESQNSVLQKTHLMSSGKGHGSIAGSRMGERRTTPFLSGERAENRLKKPTTFVC
KLKFRNELPDPSAQPKLMSMKKDPDQYTKYTITSLEKNYKPKLFVEPDLGIPLDLLDLSV
YNPPPGPRPPLAPEDEELLRDDVAVTPVKKDGIRRKERPTDKGVAWLVKTQYISPLSMDS
AKQSLTEKQAKELREMKGGRNLLDNLNDRERQIKEIEASFEACKSRPVHATNKNLYPVEV
LPLLPXHNRYEDQFVLAGFDGAPTADSEIYSKLDQSDHDLCESRAIMKSYKVTGADPANP
DKFLAYMVPSPNELSKDPYDESEDISYSWVREYQYDVRGDDVDDLTTYLVSFDEDAARYA
PLPAKLVLRKKRAKEGRSTDEVEHFPAPSRVTVRRRSTVSAIELKDAGDYSRGALSNLKR
RGFDNEDALERPQKRGRHQDVDEYSGAEDDLSD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatacaggcctttcccgcctcaaccggcgtttccgccgccgccgccgaatcaa
aaccccatcgcgccaccaccacgtggcaatcagtacaaccagaattggggttataatgcc
gccgccggcggcgatggggctgctccttcctcgtttccccagaactacattcaccacccc
catggtaattatggtcctcctagagctcaacaccctcacccaccgccgcagtactcgtac
ccgccaccgcctcctccgccggactcttcatacccgccaccaccgcctcctcaagctcct
cccgggaagaatttgccgctacagcctccgcaggcgccaatgtactaccagtctaactct
caatatgcgcagtatggtcaccaggcaatgcagccgccaccgcctcccccgccacctttg
tctcctagtttggctataccaccgccgcccccgcctccaaattctccaccacctccgcca
ccgccgaagagtagggagagtggttttgataaggggccgcatgacaaaggagcttccaag
gatgtgggagcttctgccaagcgtgaacatgggcattcaaaccatcatggggttcctcct
aaacacaagccgcctgttccattggtgaagaagtcgaatggggcgcccgggagagtggag
acagaggaagagaggaggttgaggaagaagagggagtttgagaagcaaagacaagaggag
aagcatagacagcaggcaaaggagtcccaaaattcggttttgcaaaagacgcatttgatg
tcttccgggaagggtcatggatcgattgcagggtcgcgaatgggggaaaggaggaccact
ccattcttgagtggtgagagggctgaaaataggctaaagaagccaaccacatttgtctgc
aagttgaaattccggaacgaacttccagatccaagtgcacaaccaaaactgatgtccatg
aagaaggacccagaccagtatacaaaatacacaattacatcgttagagaaaaattacaag
ccgaagctttttgttgagccagatcttgggatacctcttgaccttcttgacctcagtgta
tacaatcctcctcccggtcctagaccaccacttgcaccagaagacgaagagttattgcgt
gatgatgtggcagtgacccctgttaaaaaagatggcatcagaagaaaagaacgacctaca
gacaaaggagttgcatggctggttaaaacacaatatatttctcctcttagcatggattca
gctaagcagtctctaactgaaaaacaagcaaaagagctgcgggaaatgaagggaggacgc
aatcttttggacaaccttaatgatagagaaaggcagattaaggaaatcgaggcatcgttt
gaggcctgcaagtcacgccctgttcatgcaaccaataagaatctataccctgttgaggtt
ctacctcttttgcctnttcataataggtatgaagaccaattcgtccttgccggttttgat
ggtgctccaaccgctgattcagaaatctacagcaagttggatcagtcagatcatgatctt
tgtgaatcaagggcaattatgaaaagttacaaggtaacaggcgcagatccagctaatcct
gacaaatttttggcatacatggtcccttcgccaaatgagctatcaaaggatccgtatgat
gaatctgaagatatttcatattcttgggttcgggagtatcagtatgatgtaagaggtgat
gatgtcgatgatctgacaacatatcttgtatcattcgatgaagatgcagcacgatatgcg
ccgcttccagcaaagcttgttttgaggaaaaaaagggcgaaagagggacgatccactgat
gaggttgaacattttcctgcaccttcaagagtgactgtcaggcggagatcgactgtttct
gcaattgaactaaaggatgcaggggattattcaaggggagctctatcaaatttgaaaagg
agagggtttgataatgaagatgctcttgaaagaccacagaagaggggacgacaccaagat
gttgatgaatatagtggcgctgaagatgatttatctgattga
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