Fragaria vesca (woodland strawberry): 101304470
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Entry
101304470 CDS
T02666
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00061
Fatty acid biosynthesis
fve00071
Fatty acid degradation
fve01100
Metabolic pathways
fve01212
Fatty acid metabolism
fve04146
Peroxisome
Module
fve_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
101304470
00071 Fatty acid degradation
101304470
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101304470
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fve01004
]
101304470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101304470
Enzymes [BR:
fve01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
101304470
Lipid biosynthesis proteins [BR:
fve01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
101304470
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of breast milk
101304470
Exosomal proteins of breast cancer cells
101304470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
101304470
NCBI-ProteinID:
XP_004296905
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Position
LG4:complement(12243745..12254447)
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AA seq
695 aa
AA seq
DB search
MDSAQAQRRLQAINGHLISDVAESESILRPNSTAAEFVSEQGYSVVLPEKLHTGKWNVYR
SARSPLKLVTTFPDHPEIATLHDNFVHAVDTFRDYKYLGTRIRVDGTVGEYKWMTFGEAD
TARSAIGSGLIYNGIPKGSCIGLYFINRPEWMIVDHACSAYSYISVPLYDTLGPDAVKYI
ANHAVVQVIFCVPETLNSILSFLSDIPTVRLIVVVGGIDEQIPSLPSSTGVKVVTYSTLL
NQGRSSIQPFCPPKSDDIATICYTSGTTGTPKGAVLSHGNLIASVAGATFGMQFYPSDVY
MSYLPLAHIYERANQVMTVHFGVAVGFYQGDNMKLMDDMAALRPTIFCSIPRLYNRIYAG
ITNAVKTSGVLRERLFNAAYNAKKKALLSGKNPSPMWDRLVFNKIKARLGGRVRFMASGA
SPLSPDVMDFLKICFGGEVNEGYGMTETSCVISAMDSGDNLSGHVGSPSPACEIKLVDVP
EMNYTCNDQPYPRGEICVRGPTIFQGYHKDEVQTREVIDEDGWLHTGDIGSWLPGGRLKI
IDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVHGDSLNSSLVAIISVDQDVLKAWA
DSEGIKYESLGQLCNDPRARAAVLADLDALGREAQLRGFEFVKAVTLTVEPFTLENGLLT
PTFKIKRPQAKEYFAQVISKMYSELATSDPAPSKL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggattccgctcaagctcagcgtcgcctccaggccattaacggccacctcatctccgac
gtagccgagtccgagtccattctccgccccaactccaccgccgccgagttcgtttccgag
caagggtacagtgtggtgcttccagagaaactacatacaggaaagtggaatgtatacaga
tctgcacgttctcctttgaagcttgttactacattccctgatcatcccgaaattgctacg
ctgcacgataattttgtgcatgcagtcgatacgtttagagattacaaatatttgggaaca
agaattcgggttgatggaacagttggagaatacaaatggatgacctttggagaagcagat
actgctcggtcagcaataggttctggcctcatatataatggcataccaaagggatcttgc
attgggttgtattttattaacagaccggaatggatgattgttgatcatgcctgctctgcg
tattcttacatatcagttcctttgtatgacactctaggtccagacgctgtcaagtacatt
gctaatcatgctgttgtacaagttatattttgcgtgcctgaaacattgaatagtatattg
agcttcttgtcagatattccaactgtacgcctgattgtggttgttggagggatagatgaa
caaataccatccctcccatcttcaacaggagtcaaggttgtaacatattccacattgctc
aatcagggccgtagtagcatacagcctttttgcccaccaaaatcggatgatattgcaaca
atttgctacacaagtggtacaactggcaccccaaagggagctgtgttgtctcacggaaac
ttgattgcaagtgttgctggggccacttttggtatgcagttctacccctctgatgtttac
atgtcttatctgcctttggcacacatttatgaacgggctaaccaggtcatgacagtacat
tttggagttgctgttggattctaccaaggggataatatgaaattgatggatgatatggct
gctctaagacctactatcttctgcagtatccctaggctgtataatagaatatatgctggt
atcacaaatgctgtgaagacatcaggtgtgcttagggagaggctatttaatgctgcttac
aatgccaagaagaaggccttattaagtggaaaaaatccgtctcccatgtgggacaggttg
gtgtttaataagataaaggctaggttaggaggacgtgttcgttttatggcatcaggtgct
tcacccttgtcgcctgatgttatggactttttaaaaatatgctttgggggtgaagtaaat
gaagggtatggaatgacggagacttcctgtgttattagtgctatggacagtggtgacaac
ttatccggccatgttgggtctcctagtccagcctgtgaaatcaagcttgttgatgtacca
gaaatgaattacacatgtaatgatcaaccctatccacgtggtgaaatctgtgtcaggggt
cctactattttccaaggctatcacaaagatgaagtgcagacgagagaagtgattgatgaa
gatgggtggcttcatactggagatattggatcatggttacctggtggtcgtctgaaaatt
attgataggaagaagaacattttcaagttggcacagggagagtatatagctccagagaaa
atagagaatgtttatgccaagtgcaagtttgttgcccagtgctttgttcacggggacagc
ctaaattcttctttggtagcaattatctcagttgaccaagatgtgttgaaagcatgggct
gattctgaaggcataaagtatgaaagtttagggcaattgtgtaatgatccaagagcaagg
gccgctgtattggctgatttggatgctcttggcagggaagctcagttgagaggttttgaa
tttgtaaaagccgtgacactgacggtggaaccgttcacattggagaatggtctgctcact
ccaacatttaagatcaagagacctcaagcaaaggaatactttgcacaagtaatatccaaa
atgtactcggagcttgctacttctgatcccgccccttcgaagctatga
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