Fragaria vesca (woodland strawberry): 101304475
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Entry
101304475 CDS
T02666
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101304475
03036 Chromosome and associated proteins [BR:
fve03036
]
101304475
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101304475
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101304475
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101304475
microRNA pathway
RISC loading complex
101304475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
101304475
NCBI-ProteinID:
XP_004298218
LinkDB
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Position
LG4:14189536..14192202
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AA seq
888 aa
AA seq
DB search
MSTKGLIVAREKPFQQTKNVSTPMRVPMRRPGLGSRGQRIPLLTNHFQVGMNKSKDDFYH
YSIAMQYDDGTPVDGKCVGRKVLDKVKEVYGKELAYKEFAYDGEKTLFTGGQLPHKRLEF
MIVLDDISASTSGGSGRQEREGNRKRVKQFFRSKKIKVQFNLAAIIPMQAIANVLRGQNS
GQFQEAVRVLDIILRQNAAKQGCLLVRQSFFHNSPRNFIEVGGGVLGCRGFHSSFQATQG
GLSLNMDVSTTMILKPGPVVNFLMENQHVRDPYQIDWYKAKRMLKNLKIVTYASKKEYKI
TGLSDKPCRQQMFFLKAKRGDYGDGVEISVYEYYAQYKQMPLRDSANFPCINVGKPKKPT
YFPLELCELVSLQRYTKSLSNVQRVSLVEKSRQKPPERMSTLRDGLRSSKYEEDMMLRSA
GISISTELMPVEGRVLSAPKLRVGNGDVIFPRNGKWNFNNKTLVHPVKLERWAVVNFSAR
CDIPYLVDTMMRCADMKGISMDPPFDVFEENVQYRRQSAPVRVEKMFEYVKSKLPRPPQL
LLCILPERKNSELYGPWKRKNLSDNGIATQCIAPTKVNDQYITNVLLKINAKLGGMNSLL
TVEHVPSLPLVSKSPTMILGMDVSHGSPGQSYMPSIAAAVSSRHWPLISRYRAAVRTQSP
KTEIIANLFNPVSDKVDKGIVNELLLDFYNTSNHRKPEQIIIFRDGVSESEFNQVLNLEL
DQIIKACKFIEESWSPKFMVIIAQKRHHTKFFQAGGSADNVPPGTIVDNKVCDPKNNDFY
MCSHAGTLGTSRPTHYHVLYDELGFSADDLQELVHSLSYVYQRSSTAVSLVAPVCYAHLA
AAQMSQFIKFDEMSETGSSRGGVTCAGPVPVQEIPRLHKNVVNSMFFC
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaaggggttgattgtagccagagaaaaaccttttcagcaaactaagaacgta
tctactccaatgcgtgttcccatgaggaggcctggccttggatctagaggccaaaggatt
ccacttcttaccaaccatttccaggtaggaatgaacaaatccaaagatgacttttaccac
tatagtattgctatgcaatatgatgatggtactccagttgatgggaaatgtgttggacgc
aaagttcttgataaagttaaagaggtttacggcaaggagctagcatacaaagaatttgct
tatgatggagagaagaccttgtttactggtggacaactccctcataaaagacttgaattc
atgatagtactggatgacatatcagcgagcacgtctgggggctctggacgccaagagagg
gagggtaataggaagagagtaaagcagttctttcgatccaaaaaaataaaggtgcagttc
aacttggctgctataatcccaatgcaagctattgcgaacgtcttacgaggtcagaactct
ggccagtttcaggaagcagttagagttcttgacattatcctaaggcagaatgcagcaaag
cagggttgtctccttgttcgacagtctttcttccataacagcccgaggaacttcatagag
gttggaggaggcgtgttaggctgtaggggtttccattcaagcttccaggccacgcaaggc
ggcctgtctctcaatatggatgtatccactacaatgattctaaagcctggtcctgttgtg
aatttcctcatggagaaccaacatgtcagagatccttaccagattgattggtacaaggct
aagaggatgctgaaaaatctgaagattgtgacctatgcctccaagaaggagtacaaaatc
actggattgagtgataaaccctgcagacagcagatgttctttttgaaagcaaagcgagga
gactatggagatggagtagagatctcagtttatgaatattatgctcagtataagcagatg
ccgttacgcgattcagcaaactttccatgcattaatgttggaaaaccaaagaaaccaacc
tactttcctcttgagctttgtgaattggtttctttgcaacgctataccaagtccttatct
aatgtccaaagggtttcactagtggagaagtctaggcagaagccgccggagcgaatgtca
actttgcgtgatggactgaggagtagtaagtatgaggaagacatgatgcttcggtctgct
ggaatatcgattagtacagagctcatgccggttgaaggtcgtgtgttgtcagctccaaag
ttgagagtgggaaatggggatgtcatttttcctaggaatggcaaatggaatttcaacaat
aaaacgctagtacatcctgtaaaactagaacggtgggctgttgtgaacttctctgctcgc
tgcgacattccgtacctggtggacactatgatgaggtgtgcagacatgaaaggaatttcc
atggatcctccatttgatgtgtttgaagagaatgttcagtacagacgtcagtcagctccg
gttagagtagaaaagatgttcgaatacgttaagtccaaacttccaaggccaccgcagtta
ttgttgtgcattcttccagagaggaagaattccgagctatatggtccatggaaaaggaag
aacctttcggacaatgggattgcaacacagtgcattgcacctacgaaagtgaacgatcaa
tacatcaccaatgtgcttctgaagataaatgcaaagctaggtggaatgaactccttgcta
actgtggagcatgttccttctctacccttggtttccaagtcccccactatgatattaggg
atggatgtgtcacatggctcacctgggcagtcatatatgccttctattgcagcagcggtc
agttctaggcactggcctttgatttctcgttaccgagctgccgttcgtactcagtcacca
aaaaccgagataattgctaatcttttcaatccagtgtctgataaagtggacaaaggcata
gtcaacgaacttttgctagacttctacaacacttcaaaccacaggaaaccagagcagatt
attatcttcagggatggagtgagtgaatcagagttcaaccaagtcttgaatctggaattg
gatcagattattaaagcctgcaagttcattgaagagagctggtcgccgaagttcatggtt
attattgcacaaaagagacatcatacaaagttctttcaggctggtggttcagcagataat
gttccccccgggactatcgtcgacaacaaagtctgtgatccaaagaacaacgatttctac
atgtgttctcatgctgggacgcttggaacaagtcggcctactcattatcatgttctatat
gatgaacttggcttttcagctgatgacttgcaagaacttgtgcattctttgtcatatgtt
tatcaaaggagcagcacggccgtgtctctagttgccccagtatgctatgcccatctagca
gcagcacagatgagtcagttcatcaagtttgatgaaatgtcagagactggctcaagccga
ggtggtgttacttgtgctggacctgtgccagtgcaggaaatacctaggctacataaaaac
gtcgtcaattccatgttcttctgttga
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