Fragaria vesca (woodland strawberry): 101304530
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Entry
101304530 CDS
T02666
Symbol
NBS8
Name
(RefSeq) TMV resistance protein N-like
Organism
fve
Fragaria vesca (woodland strawberry)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
LRR_13
LRR_14
NB-ARC
LRR_4
LRR_EndoS
LRR_R13L1-DRL21
WHD_ROQ1
TIR_2
LRR_8
C-JID
LRR_Zer-1
LRR_At1g61320_AtMIF1
LRR_3
AAA_14
ATPase_2
NACHT
AAA_22
AAA
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
101304530
NCBI-ProteinID:
XP_011470429
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Position
LG7:complement(23094776..23096835)
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AA seq
1327 aa
AA seq
DB search
MASSSSSSSARPCKYDVFLSFRGEDTRKIFVGHLYRALQQKTINAFIDSEELSKGNNISE
LLTAIEDSKISIVVLSQNYASSTWCLKELVKIMDCMDTKKQVVLPIFYEVDPSDVRKIKG
KFAKSFAKHGKNSDLDEEELKRWRSALTRVADLSGWDSRKYEDDGKLIEEIVESALKELI
HTSYSKANGLVGMDSHIRKMNSRLSLEVNDVRVVGIWGMGGLGKTTIARAVYDEIAWQFE
YSCFLNNVKEAFINKREVQMQEEFLFKLLKEKVQSIDLSRGRNMIMKRLGTKKVLVVLDD
VETFAQIEALLGELHAFGEGSRIIVTTRNKQSLSGVNQTYEPRCLSGDEALGLFMKYAFR
TNQPSREYDHLSRCATAYAHGLPLALKVLGSFLDNKSICEWEAVLEKLKSIPHTEIQHVL
RISFDGLDDSEKDIFLDIACLFRYWEKDYVTELLDSCGFFPRNGLRVLVDKALITISSIT
GDLSDDDELDMHDLLQEMGREITRLESTKEPGKRSRLWSYEDVNRVLTQNTATDAVECLK
LDLSNSKADLCINCGAFERMTKLRLLIIHYSFDSRYDDYQSNRREELCPVDGCKQLTRGD
FEFLSDELRFLLWHGCPLKSLPSAFIPKNLVRIDMRGSHIQELWEGIKPLQNLKVIMLSH
CQYLVKIPDLTEAIHLEKLYLNGCKSLRELHPSISDLQELYYLDLMGCKELKSFPSSIHM
KSLQTLALSGCSNLEKFPVISDVMDKLRYLHLWGTAIKELPSSINNFTGLGTLDLRGCRE
FRSLPSSIDMKWLHTLRLSGCSNVEKFPEISEYMTKLRCLDLDGTAIKELHSSINNLTGL
VELNLKSCTELKSLPTSIHLSSLRTLNLKGCSSLENFPEISGIMKELSVLLLDGTGIKGL
PSSIDQLEGLQIISMQFCRSLEFLPNSMCRLVKLARLDLSGCSALHNLPENLGDLKSLKE
FHVRGSGIKQLPFSILRLGDRLSFIGCEEMTAPLSAWPSIEGYCSYSVLLHLDLRDCNVL
ELSDGIVHLSSLKSLNLSRNNLESLPVAMNQLGCLTHLVVQDCKRLRSIPELSSSISYID
AHNCTALETVSKPRPQYQTNHFFTFSNCLQLVQANLFRDIVETHPHLQDNHMPPLRLKMS
LPGSEVPDWFTIRSRGISVTMQLPADWFLGFMGFTICAVGKQYQGVYQYACPLSAACLCT
LKGDSGECCFSFDMLDSVFRIDRILRSDHMFWRYVSWAECHLIAKGKLVNETYTEATFQI
IVRSESVTEQLSIRSCGVDLLYDDPDKMPNLNMPEAQVHADSIETGDYFMDPYELRNIKR
NRRRLSF
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcttcttcttcttcatccgcccgcccctgcaagtacgatgtcttcctcagt
ttcagaggagaagacacccgcaaaatcttcgtcggccatctctacagagccctgcaacag
aaaacgatcaacgccttcatcgattctgaagagctcagcaaaggcaacaacatttcggaa
ctactcacagctattgaggactcgaagatttcgattgtagttttatctcaaaactatgcc
tcttccacttggtgcttaaaagagctcgtcaaaatcatggattgcatggatacaaagaag
caggtagtgctgcccatcttctacgaagttgatccctctgatgtacggaaaatcaaggga
aaatttgcaaaatcttttgccaaacatggaaagaattctgacctcgatgaggaagagttg
aagaggtggaggtccgctctaacaagagtagctgatctttcaggctgggattcgagaaaa
tatgaggatgatggcaagcttattgaggaaattgttgagagtgctcttaaagaactgatc
cacacatcatacagtaaagccaatggcttggttggaatggattcccacattagaaaaatg
aattcaagattatctcttgaggtgaatgatgttcgtgttgttggaatatggggtatgggt
ggtttagggaaaacaacaattgctagagctgtttatgacgaaattgcttggcagttcgaa
tactcttgctttcttaacaacgtcaaggaagcctttataaacaagcgtgaagtacaaatg
caggaagaatttctgtttaaattgttgaaggaaaaggtgcagagtatagatttgagcagg
gggaggaatatgataatgaaaaggctaggtacgaaaaaagtcttggttgttcttgatgat
gtggaaacttttgctcaaattgaggccttgcttggtgaattacatgcatttggcgaagga
agtcgaatcattgtaaccacaagaaataagcaatcactaagtggagttaatcagacatat
gagccgaggtgtttaagtggtgatgaagctcttggtctgtttatgaaatatgctttcaga
acaaatcaacccagtagagagtacgatcatctgtcaaggtgcgccacagcatatgctcat
ggtttgcctctagcacttaaagtcttggggtcttttcttgataacaaaagtatatgtgaa
tgggaagccgtgttagagaaactgaagagtatcccacacacagaaattcagcatgttctt
agaataagctttgatggactagacgattcagagaaagacatatttctagatattgcatgt
ctctttagatactgggaaaaagattatgtaacagaattactagacagttgtggcttcttt
ccccgcaatggattaagagttctagttgacaaagcactcataactatatcgtctatcact
ggagacctatcagacgatgatgagctcgacatgcatgatttactacaagaaatgggtaga
gaaatcacccgcctagaatctactaaagaacctggaaaacgcagtaggttgtggagttat
gaagatgttaatcgtgtattgactcaaaatacggctacggatgcagttgaatgcttaaag
ctagacttgtcgaattcaaaagccgacctatgcataaattgtggagcctttgaaagaatg
acgaagcttagactactcataatccattattcattcgactccagatatgacgactaccaa
agcaaccgccgtgaggagttatgcccagttgatggctgtaaacaactcacgaggggggac
ttcgagtttctttctgatgagttgaggtttctcttatggcatggatgcccgctaaagtct
ttgccatcagcctttatcccaaagaatcttgttagaattgacatgcgtggtagtcacatt
caagaactttgggaaggaatcaagcccctgcaaaatctgaaagtcatcatgttaagtcac
tgtcaatatcttgttaaaattcctgacttgactgaggcgatacatctggagaaactatat
cttaatggctgtaaaagtttacgtgagcttcatccatccatctctgatcttcaagagctt
tattatttggatttaatggggtgcaaagaactcaagagtttcccaagcagcattcacatg
aaatctctacaaacccttgctcttagtggctgttcaaatcttgaaaagtttccagtaatt
tctgatgttatggataagctaagatatcttcatctatgggggactgcaattaaagaactg
ccatcatcgattaataattttacaggccttggtactttggacctcagaggttgcagagaa
tttaggagtctgcctagcagcattgatatgaaatggctacacaccctcaggctttctggc
tgttcaaatgtggagaagtttccagagatctcagagtatatgacgaagctaagatgcctt
gatctagatggaactgcaatcaaagaactacactcatcaattaataatctcactgggctc
gtagaattgaatctcaaaagttgcacagaactcaagtcactaccaaccagcattcatcta
agttctcttcggacacttaacctcaagggctgctcaagtcttgaaaactttccagagatt
tcaggaatcatgaaggagctatcagtgcttcttttagatgggaccggaattaaaggactg
ccctcgtcaattgatcagcttgaggggctgcaaataataagtatgcagttctgcagaagc
cttgaatttcttcccaacagcatgtgtcgtctggttaaacttgcacgtctcgatctgtct
gggtgctcagcacttcataacttgcctgagaatttgggggacttgaaatccttgaaagaa
tttcacgtaaggggtagtggtataaaacaacttccattttctatccttcgtttgggggat
agattatcattcattggatgtgaagagatgacggcacccttgtcagcatggccatcaatc
gaaggatattgtagttactctgttctgctacatcttgatttaagagactgcaatgtgttg
gaattatcagatggtattgttcatttgtcatctttgaaatcattgaacctgtccagaaac
aatttggagagcttaccagtggcaatgaatcaacttggatgtttaacacatcttgtagtg
caagattgtaagagactgagatcaataccagagctttcatcgagtataagttacatagat
gcacataattgcacagctttggaaacagtttcaaagccaaggcctcaataccagacgaat
catttctttacattttctaattgccttcagctggtacaagcaaatctatttagagatatt
gtggaaacacatccacatttgcaggacaatcacatgccacctcttcggttgaaaatgtct
cttcctgggagtgaagttcccgattggttcaccattcggagcaggggaatttcagtaact
atgcagctaccagctgattggtttttgggatttatgggattcactatctgcgctgttggt
aaacaataccagggtgtttatcagtatgcttgtcctttatctgctgcttgtttatgtact
ttaaaaggagatagtggcgagtgttgtttcagctttgatatgctagattcggtgttcaga
atcgatagaatcctacggtcagatcacatgttctggagatatgtttcgtgggctgaatgt
cacttgattgcaaagggaaaactggtcaatgaaacatatactgaggccacatttcagatt
atagtaagaagtgaatccgtaacagaacaactcagcatcagaagctgcggagttgatttg
ttatatgatgatccagataaaatgcctaatctaaacatgccagaggcccaagttcatgca
gacagtattgagactggagattattttatggacccgtatgaattgagaaacataaagaga
aacagaaggagactgagtttctga
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integrated database retrieval system