Fragaria vesca (woodland strawberry): 101304619
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Entry
101304619 CDS
T02666
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101304619
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
101304619
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101304619
03036 Chromosome and associated proteins [BR:
fve03036
]
101304619
Protein phosphatases and associated proteins [BR:
fve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101304619
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101304619
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101304619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
101304619
NCBI-ProteinID:
XP_004307335
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All DBs
Position
LG7:complement(14550800..14553760)
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AA seq
432 aa
AA seq
DB search
MLTKRKPDPQPMEPLPLFQNVAVSDRASLFLRKVHLCSSLCDFSTPLTSAPQIELKRQTL
LELVDFLDSSSGKLAPNLHEDFIRMVSVNLFRCLPPSSDLGDLDDDEPYQEPSWPHLQIV
YELLLRYIASSETDAKFAKRFIDHIFVLRLIELFDSEDPREREYLKTLLHRIYGKFMVHR
PFIRKAMNNVFYRFIFETQRHCGIGELLEILGSIINGFALPMKEEHKLLLIRALIPLHKP
KGFWAYHHQLAYCIIQFVDKDYHLAELVIRGLLKYWPVTNCQKEVLFLAELEEVLEATPA
SEFQRCMLPLFRQIGRCLTSSHFQVAQQALYLFNSEHVVNLIAQNRNVILPVIFDALEKN
TQGHWNQGIHDLTTNVRRIFQEMDSELFKECQEQYLEKVTRARSLEEQRELTWKKIETVA
ATAGADDMVLVN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaaacgcaaacccgacccgcaacccatggagcccctcccgctcttccaaaac
gtcgccgtttccgaccgcgcctccctcttcctccgcaaggtccacctctgctcctccctc
tgcgacttctccacccccttaacctccgccccccaaatcgagctgaagcgccaaacccta
ctcgagctcgtcgacttcctcgactcctcctccggcaagctcgcccctaacctccacgaa
gacttcatccgcatggtctccgtcaacctcttccgctgcctcccgccctcctccgacctc
ggcgacctcgacgacgacgagccctaccaggagccctcctggccccacctccaaatcgtc
tacgagcttctcctcaggtacattgcttcctccgaaaccgacgccaagttcgccaagcgc
ttcattgatcacatctttgtgttaagactcatcgagcttttcgactccgaagacccgagg
gagagggagtacctgaaaacgcttctgcataggatatatggcaagttcatggtgcatagg
ccgtttattaggaaggccatgaacaatgtgttctataggttcattttcgagacgcagagg
cattgcgggattggggagttgttggagattctggggagtattatcaatggtttcgcgttg
ccgatgaaagaggagcataagttgctcctgatcagggcgcttattccgctgcataagcct
aaggggttttgggcatatcatcaccagttggcgtattgtattatacagtttgttgataag
gattatcatcttgcggaattggtgatcagagggctgttgaagtattggccggtcacgaat
tgtcagaaggaggttctgtttcttgcggagctggaagaggttttggaggctactcctgct
tcggagttccagaggtgtatgctgccgctgtttagacagattggacggtgcctcactagc
tcgcatttccaggttgcccaacaagctctatacttgtttaacagcgagcacgttgtaaat
ttaatagctcagaaccggaacgtgatattaccagtaatatttgacgcgttagagaagaac
acgcaaggtcactggaaccaaggtatacatgatctgacgaccaacgtgcgaaggatattc
caggaaatggactcagaattgttcaaagagtgccaggagcaatacttagagaaagtaacc
agggccagatcattggaagagcagcgggaattgacatggaagaaaatagagacagtcgcg
gcaactgcaggggccgatgatatggttttggttaattaa
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