KEGG   Fragaria vesca (woodland strawberry): 101304675
Entry
101304675         CDS       T02666                                 
Name
(RefSeq) transportin-3
  KO
K15436  transportin-3
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03013  Nucleocytoplasmic transport
fve03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101304675
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101304675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fve03016]
    101304675
Transfer RNA biogenesis [BR:fve03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    101304675
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_3rd IBN_N HEAT_IPO9_c CRM1_C
Other DBs
NCBI-GeneID: 101304675
NCBI-ProteinID: XP_011464546
LinkDB
Position
LG5:complement(10878876..10888712)
AA seq 961 aa
MELQNTVKDALNALYHHPDDAVRMEADRFLQNFQKTLDAWQVADNLLHDSTSNLETLIFC
SQTLRSKVQRDFEELPSEAFRPLRDSLNNLLREFHKGAPKVRTQISIAVAALAVHVPAED
WGDGGIVNWLRDEMNSHPEYIPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEV
ALNILTACLQMYSVFLEKIEXRKSWFLTSVRFRIPGSILASHPLVLTALSSLNSEFVSEA
AVNVISELIHYTTSRESGGVQVQMPLIQVIVPQVMNLKAQLRDSSKDEEDVKAIARLFAD
MGDSYVDLIATGSDESKLIVQALLEVAAHPEYYIASMTFNFWHSLQVTLTRRDSYISLGN
EFSIEAEQNRRLHIFRPAYESLVSLVSFRIQYPRDYQDLSYEDLKEFKQTRYAVADVLID
AASVLGGDAALRILYMKLDEAAACCQNEESEWRPAEAALFGIRAISSYVSVVEAEVMPKV
MGRLLKLPQHPQLLQTVCLTIGAYSKWLDAASGGLSILPSVIDVLMNGLAKSEDSAAAAA
LAFRQICDDCRLKLCGCLEGLFNIYHRAVNGEGTLKVCADDSLHLVEALSKVISELPPDQ
AKRALEALCLPVVSPLQEVLSQAPEMLNNRPARDFTVHIDRFGYIFRYVTHAEAVADAVQ
RLWPIFKAIFELRAWDMRTMESICRACKYAVRTSGRCMGTTIGEMLEKIQELFKQHHQPC
FLYLSSEVIKIFGSDPSCADYLRNLIESLFQHTTRILTSIQEFTSRPDIADDCFLLASRC
IRYCPHLFIPSAAFPALVDCSLIGITVQHREASNSILTFLSDIFDHANSTEGAIYSPIRD
TVIIPRGPSMARVLIAALTGAIPSSRLENVTYALLSLSRTYGAQSVEWARGSVSLIPSTA
VTEVERARFLQALADAAAGVNVNSLSVPLEELSDVCRRNRTVMDIVQGALRPTELNIAAV
S
NT seq 2886 nt   +upstreamnt  +downstreamnt
atggagctccagaacactgtgaaagatgccctaaacgcactgtaccatcatcccgacgac
gccgttcggatggaagccgatcgctttctgcagaatttccagaaaaccctagacgcctgg
caggttgctgataacttgcttcacgactccactagcaatctggaaactttgatattttgc
tcccagacccttagaagcaaggtacaacgagattttgaagaactaccttctgaagctttt
cgcccattgcgcgattccttaaataacttattgagagagttccataagggtgcccctaaa
gtcagaactcagattagcattgctgttgctgctctggctgtacacgttcctgctgaagat
tggggggatggtggtatagtaaactggcttcgggatgagatgaattcacatccagaatat
atacccggatttttagagttactgacagttttgcctgaggaagtattcaactacaagata
gcagctcgcccggaaagacgccggcaattcgagaaagaacttacttctcaaatggaggtt
gctcttaacatattgacagcatgcctgcaaatgtattcagtcttccttgagaaaattgaa
tagagaaagtcttggtttttaacttctgttcgtttcaggatccctggatctattcttgca
tctcacccattggtgctcacagctctttccagcttgaattctgaattcgtttcagaggca
gctgtaaacgttatttccgagttgatacactatacaacatctagagaatctggtggtgtg
caagttcaaatgcctctaattcaagtcattgttccccaagtgatgaatctcaaggcacag
cttagagactcttccaaggatgaagaagatgtgaaggctattgctcgattatttgctgac
atgggggattcatacgtcgacctgattgcaactggttctgatgaatcaaagttgattgta
caagcattattggaagttgctgcacatccagaatattatattgcttccatgacattcaat
ttttggcatagtcttcaggtgaccttgacaagaagggattcttatatttcattgggtaat
gaattctccattgaagctgagcaaaacagaagactgcatatattccgcccggcttatgag
tcgctcgtatctttggttagcttccgaattcaatatcctcgagattatcaagacctgtca
tatgaggaccttaaggagttcaagcagactagatacgctgttgcggatgttttaattgac
gcagcatcagttttaggaggtgatgcggcactgagaattctttacatgaaacttgatgag
gccgcagcctgctgtcagaatgaagaaagtgaatggcgcccagcagaagctgctttattt
ggcatccgggctatatcaagttatgtatctgtagtggaagctgaagtaatgcctaaggtc
atgggcagactactaaaactacctcagcatccccaacttcttcagacagtgtgcttaaca
ataggagcttattcaaaatggcttgatgcggcatctggtggactctctatactgccttca
gttatagatgtcctcatgaatggccttgctaaatctgaagattctgcagcagctgcagct
ttggcatttcggcagatctgtgatgattgccggttaaagctctgtggatgtttggaaggc
ctttttaatatatatcacagggcagtgaatggtgaaggtactttgaaagtctgtgctgac
gattcattgcatctagttgaagctttaagcaaggtcattagtgaacttcccccagaccaa
gctaaaagggctcttgaggccttgtgtttgccagtcgttagtcctttacaggaagttctt
agccaagcgccagagatgctaaataacaggcctgctcgtgatttcacagttcatattgat
cggtttgggtacatctttagatatgtaactcatgcagaagctgtggcagatgcagtccag
aggctttggccaattttcaaagccatatttgaacttcgtgcttgggacatgcggacaatg
gagtctatttgccgagcttgcaaatacgctgtgagaacttctggaaggtgcatgggaact
acaattggagagatgctagagaagattcaagaattatttaaacagcatcaccaaccatgc
tttctttatctctctagtgaagttataaagatatttggctcagacccgtcgtgtgctgat
tatttgagaaatttgattgaatcactatttcagcatacaacacgtattctcacgagcatc
caagaatttacttccagaccagatatagcagatgattgctttctactggcgtcaagatgc
atccgttattgtccgcacttgtttattccttctgcagcatttccagcgttagtagattgc
tccttgattggaataacagtacaacacagggaggcgtcaaattcaatattgaccttctta
tcagatatatttgatcatgcaaactccactgagggggcaatatactcacccatcagggat
actgtaattattcctcgaggacccagcatggcaagagttttgattgctgcattaacagga
gcaattccaagctctcgcctagaaaatgtaacttatgcactactatcactatctcgaaca
tatggggcacagtcagtggagtgggccagggggagtgtttcattaattccttcgacggct
gtgacagaagttgagcgtgcaaggtttttacaggcattggcagatgctgcagctggggtt
aatgtcaattccctttcagttccactcgaggagctatcagatgtttgccggcgtaaccga
acagtcatggatattgttcaaggagctttgaggccgacagaattgaatatagcagctgta
tcataa

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