Fragaria vesca (woodland strawberry): 101304810
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Entry
101304810 CDS
T02666
Name
(RefSeq) lisH domain-containing protein C29A3.03c
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101304810
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101304810
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
101304810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-C3HC4
DUF7809
Prok-RING_4
Mtf2
zf-C3HC4_2
HAD_2
zf-Nse
SF-assemblin
zf-C2HC5
Motif
Other DBs
NCBI-GeneID:
101304810
NCBI-ProteinID:
XP_004288308
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All DBs
Position
LG1:15225448..15228731
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AA seq
383 aa
AA seq
DB search
MELIKDAFERVTKKQKLSCSKNQEVLDLIDQEIKQTLQKIQSNECASQVDFKSTIAELKN
KLKDIAPVSQTESTQKELNLALSKYPKLLEKSFNPDIAKAYRNIEFDAHTVNEIIGSHFY
RQGLFELGDCFLSEAGEPESTAAMKSQFQEMFQIVEAMKCQNLEPALKWAIANSDKLKPN
GSDLLLQLHSLQFMGILQKGDKYGAIAYAKTCLAPFASDHMAEFQKLMVSILWAGKLDMS
PYFHLLSKANWEKVIGGLTRQFCNILGQSYESPLSMTIAAGVQGLPPLLKFMNVMVGKKN
EWQTMKQLPVPVELDREFQFHSIFVCPVSKEQATDENPPMLMSCGHVLCKQSITKMSKNG
TKTFKCPYCPSDIDSAQCRQLHF
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggagctgattaaagatgcatttgaacgtgttacgaagaaacaaaagctgtcatgctcc
aaaaatcaagaagttcttgatctgattgaccaagaaatcaagcagacgttacagaaaata
cagtctaatgagtgtgcatctcaggttgattttaaatctaccattgctgaactcaaaaac
aagttaaaagacattgcacctgtcagtcagaccgaaagcactcagaaggaactgaatctg
gcattgagcaagtacccaaagcttctcgagaaatcattcaatcctgatatagccaaggct
tatagaaacatcgagtttgatgctcatacggttaatgagataataggcagtcatttctat
aggcagggccttttcgaacttggagactgttttctaagtgaggctggagaaccagaatct
acagctgctatgaaatctcagtttcaggagatgtttcagatagttgaagcaatgaaatgt
cagaacttagagccagcactgaagtgggccattgctaattctgataaactcaaaccaaat
ggatcagatctactactgcaacttcacagtctacagtttatgggtatattgcagaaggga
gacaaatatggagctattgcttatgccaaaacttgtcttgctccttttgcttctgaccat
atggctgaatttcagaagctcatggtatctattttatgggctggaaagcttgatatgtca
ccatactttcacctattatccaaagcgaattgggagaaagttattggggggctaactagg
cagttctgcaatattcttggccagtcttatgagagcccattgagcatgactatagctgct
ggagttcaggggttgccacctcttctcaagtttatgaatgtaatggttgggaagaaaaat
gaatggcagactatgaagcagttgcctgtgccggtggagttggaccgtgagtttcagttc
cattctatttttgtttgtccggtgtccaaggaacaagcaactgatgaaaatccccctatg
ttgatgtcatgtggacatgtgctctgcaagcagtctattacaaagatgtcaaagaacggc
acaaaaaccttcaaatgtccttactgtccttccgatatcgattcagcacagtgtaggcag
ctccatttctga
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