Fragaria vesca (woodland strawberry): 101304893
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Entry
101304893 CDS
T02666
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101304893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101304893
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101304893
mRNA degradation factors
5'-3' decay
Lsm complex
101304893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
101304893
NCBI-ProteinID:
XP_004303709
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All DBs
Position
LG6:24726154..24728755
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AA seq
128 aa
AA seq
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MSWAGPEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL
YCDLPLGLYVIRGENVVLIGELDAEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccggcccagaagatgtttacctctctacttctcttgcgagctatcttgac
aagaaaattcttgtgctgctccgagatggtcgcaagcttttaggaatactccgttccttt
gatcaatttgccaatgctgttcttgagggtgcttgtgaaagggtcattgttggcgaactt
tattgtgatctccctttgggtctttacgtaattcgtggggagaatgttgttctaattggt
gaactggacgcggagagggaggaacttcccccacatatgacccgtgtttcacctgcagaa
attaaaagggcacagaaagcagaaagagaagcttctgatctcaaaggcaccatgagaaaa
agaatggagtttcttgacatggactaa
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