Fragaria vesca (woodland strawberry): 101304916
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Entry
101304916 CDS
T02666
Name
(RefSeq) dicer-like protein 4
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fve03036
]
101304916
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101304916
microRNA pathway
RISC loading complex
101304916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
DND1_DSRM
dsrm
PAZ
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101304916
NCBI-ProteinID:
XP_011469001
LinkDB
All DBs
Position
LG1:2107765..2120210
Genome browser
AA seq
1638 aa
AA seq
DB search
MGDAPPPAESGDVESGHGAPRPEKDPRRVARKYQLELCQKALEENIIVYLETGCGKTHIA
VLLMYELRHLILKPQKNICVFLAPTVALVQQQARVIEDSLDLKVGTYCGSSRQLKTHQDW
EKEIEQYEVLVMTPQILLRNLYHRIIKMEIIALLIFDECHHAQITSNHPYAEIMRFCKSD
VTKLPRIFGMTASPVVGKGASSQANLSKSINSLENLLDAKVYSVEDKTELNCSVVSPVIH
VHSYSPGISGTSSPFMTLDSKLEQVKRQCVAELGKKTSDYQRLRSTKKTLKRVHDSIMFC
LENLGLWGALQAKHIVSSGDHFERNELIEEGNNGIEAEQNNSDDTVCAEYLAQAADIIRT
DYVKDAVASGLSCIDILKEPFFSSKVLRLIGILSSSRLQQNMKCIIFVNRIVTARSLSYI
LQNLKNLASWKCDFLVGVHSKLKSMSRKTMQITLDKFRSGELNLLVATKVGEEGLDIQTC
SLVIRFDLPETVASFIQSRGRARMPQSEYVFLVNSGSQKELDLIENFRKDEDRMNMEISF
RTSSETFISPEEQTYKVASSGASITSGYSISLLHQYCSKLPHDEYYVPSPEFYFLGDLEG
TICHIILPSNAPMHQIVSAPQFSMEDAKRDACLKAIEELHKLGALSDYLLPLQDNANVEE
LLQDSSDSDSLEDEDSRGELHEMLVPAVLKESWNKSEDLVTLSSYYIQFDPYPNDRIYKS
FGLFVKAPLPAEAESMELDLHLAHGRSVMTKLVPSGFAEFVKDEILLAQNFQEMFLKFIL
DRSEFVSEFVPLGKYEFSGSSSSTFYLLLPVTLGENDKISIDWRIIKKCLSSPVFRGPGH
AMDSKITSSGIRLASGYTSISEVEDSIVYVSYKKSFYFITNVSRERNAYSLYKEDPEPLI
YVDHLSKKFDISLIYPEQPLLCAKPVFSLHNLLHNRRQEDSEAQQLDEYFIYLPPELCEL
KVIGFSKDIGSSVSLLPSIMHRLENLLVAIELKHVLCTSFPEGAEVTAQRVLEALTTEKC
QERFSLERLELLGDAFLKFAVGRHFFLLHALLDEGQLTRKRSNVVNNSNLLKLATRSNLQ
VYIRDQPFEPSQFFALGRPCKNICDQETIGSIDSQDLCSAVKHSHDCEVRCSKGHHWLHK
KTIADVVEALVGAFIVDSGFKAATAFLRWIGIKVEFEASEVTQVCIASSRYIPLAARIDI
AALETSLGYKFLHRGLLLQAFVHPSYNKNGGGCYQRLEFLGDAVLDYLITSYLYSVYPKL
KPGHMTDLRSISVNNKAFATVAVARSFHKFLVSDSCTLSKAIKTYVNFVETSASDSSLVD
GPTCPKALGDLVESCLGAILLDTGFDLNRVWNIMLSFLKPVMSFSNVQLSPVRELRELCQ
AHAWDLKFLPSKKGKTFSIEATVKGNNVSATASSTGLNKKDTIKISAQLIFEKLKAQGNI
PKSKLTLEEVLKSCCKMEAKLIGYDETPIDVTAPDIIGFENLKVQEPSSSSSNSDVHSIS
EASSSHSCVKRVGQSPASSGAVKMDSHDSCNNHSSDADSKTRGVPHNLTARSHLYEACAA
NYWEPPVFECCQEEGPSHLKSFIYKVTVKIDDASDMLLEANSAPRTSKKAAAEHAAEGAL
WYLEKKGYIEKRSQTEEH
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgcgcctcccccagcggagagtggggatgtggagtcgggtcatggagctccg
aggccggagaaggatccgaggagggttgctcggaagtatcaattggagctgtgtcagaaa
gctttggaggagaatattattgtctacctggagactggctgtggaaaaactcacatagcg
gtgctgctcatgtatgagctgcgccacttgatactcaaacctcagaagaacatatgtgtg
tttcttgcgcctacggtggcgcttgttcagcagcaagcaagggttatagaagattccctt
gatttgaaggttgggacctattgtggaagctccaggcaattgaaaactcatcaagactgg
gaaaaagagattgaacaatatgaggttcttgttatgactcctcaaatactgctgcgtaac
ttgtaccaccgtattattaagatggagataattgcattgctgatttttgatgagtgtcat
catgcgcaaatcacaagcaaccatccttatgcagaaattatgcgattctgcaagagtgat
gtcacaaaacttcctcgtatatttggaatgactgcatctccagttgtaggtaaaggcgct
tctagtcaagcgaacttatcaaagagtatcaatagtcttgaaaatttacttgatgctaag
gtttattcggttgaagacaagacagaattgaattgttctgttgtttctcctgttatacat
gtacatagttatagtcctggtattagtggcacatccagccccttcatgactcttgatagt
aaacttgagcaggtgaaacgccagtgcgtagcggaacttggtaagaagacgagtgactac
caacgtctaaggagtacaaagaaaacattaaagagagtgcatgacagcataatgttttgc
ttggaaaatcttggcctctggggtgcattacaagctaaacatattgtttcgagtggcgat
cactttgaacgaaatgaattaatagaggaaggcaataatggtatagaggcagagcaaaat
aatagtgatgatactgtgtgtgctgaatatctggctcaggcagctgacatcattcgcacc
gactatgtgaaagatgctgtagcatctggtctatcttgtatagatatcttaaaggagccg
tttttctcaagtaaggtcttacgtcttattggaattctttcatcctccaggttgcaacag
aatatgaaatgcataatatttgtcaataggattgttactgcaagatccttgtcctacata
ctacaaaaccttaagaatctagcatcttggaagtgcgattttcttgtaggagtccactct
aaactgaagagtatgtcaaggaaaacaatgcagatcactcttgataagtttcggtctgga
gagttgaatctattggttgcaactaaagttggtgaagagggtctagatattcagacttgc
agccttgtgatacgatttgatcttccagaaactgttgctagctttatacagtcacgaggt
cgtgcacggatgcctcagtctgaatatgtatttttggtaaacagtggtagtcagaaagag
ttagatttaatagaaaacttcagaaaagatgaagatcgaatgaatatggagatttctttc
agaacatccagtgagacttttattagtccggaggaacaaacctataaagttgcttcttct
ggagcctccatcacttctggatatagcatctccttgttacaccagtattgttcgaagctt
ccacatgatgagtattatgtccccagtccagaattctattttcttggtgatttggaggga
actatttgccatataattttaccttcaaatgctccaatgcatcaaattgtcagtgcacca
caattttcaatggaagatgccaaaagagatgcttgtctaaaggccattgaagaattgcat
aaattgggtgccttaagtgactatctcttgccactgcaagacaatgcaaatgtggaggag
cttttgcaagactcttctgattctgacagtttagaagatgaagactcacgaggggaacta
catgaaatgctggttcctgctgtcctaaaagagtcatggaataagtcggaggatcttgtc
actctcagctcttactatatacaatttgatccttatcctaatgatagaatctataaaagt
tttggtctattcgtcaaggcacctcttccagcggaggctgaatcaatggaacttgatctt
catctcgctcatggtagatctgtgatgacaaagttggtgccatctggatttgcagaattt
gtcaaagatgagatcttgctggctcaaaactttcaagaaatgttcctcaagttcattctg
gaccgatcagaatttgtttcagaatttgttccactgggaaagtacgaatttagtggatcg
agctcatcaaccttctacctattgcttccggtaactttgggtgaaaatgataagataagc
atagattggaggattatcaaaaaatgtttatcctctccagtattcaggggcccgggacac
gctatggacagtaaaattacatcttcgggtattcgacttgcatctggttatacaagcatt
agtgaagttgaggatagtatagtttacgtctcatataagaagtcattttacttcatcact
aatgtttctcgagaaagaaatgcctacagcctatataaagaagatccggaacctttaatc
tatgtggatcatcttagtaagaagtttgacatttctctcatataccctgagcaacctctt
ctgtgtgcaaaaccagtgttctctttgcacaacttgctacacaatcgtaggcaagaagat
tcagaagcacaacaactagacgagtattttatatatctgcctcctgagctttgtgagctg
aaggtaattggtttttcaaaagatatcggaagttcagtgtctctgttaccatcaatcatg
caccgtctggaaaacttgcttgtcgccatcgaactaaagcatgtattatgtacttcattc
cctgaaggagccgaggttactgcccagagagttctagaagcactcacaactgagaagtgc
caggagcgattttcccttgaaaggcttgaactactaggtgatgctttcctcaaatttgca
gtcggacggcactttttccttttgcatgcattgcttgatgaaggtcaactaacaaggaag
cgttcaaatgtggtaaacaattccaatttactgaagctagctactagaagcaacttacag
gtgtacatacgggatcagccatttgaaccctctcagttctttgctttaggccgtccttgc
aaaaatatttgtgaccaggagacaataggatctattgattctcaagatttatgcagtgca
gtaaaacactcacatgattgtgaagtcagatgtagtaagggtcaccattggttacataag
aaaacaattgctgatgttgttgaagcccttgttggagcattcatagttgacagcggtttt
aaagctgctactgcatttctcagatggattggcataaaagtagaattcgaagcatcagaa
gttactcaagtatgcatagcaagcagcagatacattccacttgctgctcgcatagacatt
gctgcccttgaaacttcattagggtataagtttctccacagagggttgctgttacaggca
tttgtacatccttcttacaacaaaaatggaggaggttgctatcagagattggagtttctt
ggagatgctgtcttggattacttgatcacctcatacctgtattcagtttatccaaagtta
aagcctggccatatgacagacttgagatcaatttctgtgaataataaagcatttgctact
gttgcagtagctcgatccttccacaagtttctagtctctgactcctgtaccctttctaag
gctataaagacttatgtgaactttgttgagacatctgcatcagatagtagtctggttgat
gggccaacatgccccaaggctctgggcgacttggtagagtcttgtcttggtgcaattctt
cttgatacaggattcgacttgaatcgtgtttggaatataatgctatcgtttctgaaacca
gtcatgagcttctccaacgttcagcttagtcctgttagggaactacgggaactttgccaa
gctcatgcatgggatcttaaatttcttccatcaaagaagggtaaaacattttcaattgag
gcaacagtgaaggggaataatgtttctgctactgcttcctcaactggcttgaacaaaaag
gatactattaaaatttctgctcaattaattttcgaaaagttgaaggctcaaggcaatata
ccgaagtctaagttaactttggaggaagtcttaaagtcatgctgcaagatggaagccaaa
cttatcggatatgatgaaacaccaatagatgttacagctcctgatataattggatttgag
aacttaaaggtacaagagccttctagcagcagttccaactcagatgtgcattctatcagt
gaagcaagcagtagtcactcctgcgtaaagcgtgtaggacaatccccagcatcaagtgga
gcagtcaaaatggacagccatgattcctgtaacaatcatagctctgatgctgactcaaaa
accagaggtgtgccacacaatttaacagcaagatcgcatctgtatgaagcctgtgctgca
aactattgggaaccccctgtatttgaatgttgccaagaggaaggaccaagccacttaaaa
tcgttcatttacaaggttacagtaaagatagatgatgcttcagatatgctgttggaggcc
aatagcgcacctcgtacgagcaagaaagcagcagcagagcatgcagcggaaggcgcactt
tggtacttggaaaagaaagggtacatagagaagagaagtcaaacagaggaacattaa
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integrated database retrieval system
