Fragaria vesca (woodland strawberry): 101304997 Help Entry 101304997         CDS       T02666                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL4   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism fve  Fragaria vesca (woodland strawberry) Pathway fve04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:fve00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     101304997  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:fve04121]     101304997 Enzymes [BR:fve01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      101304997 Ubiquitin system [BR:fve04121]  Ubiquitin ligases (E3)   HECT type E3    101304997 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HECT Arm HEAT_2 Adaptin_N HEAT Motif Other DBs NCBI-GeneID:  101304997 NCBI-ProteinID:  XP_004306227 LinkDB All DBs Position LG6:34306085..34313029 Genome browser AA seq 1567 aa AA seqDB search MESRGQKRSEIDDELPADKRACSSLEFRPSTSSSSQTPLNSVSSTPENNDQNNDHADHMD TESEGGEPEKDSAYDSCDDEEEEDHRHSELRDIQRQRAPGDHGKFQTIISSLSEEVDLSQ QLVMLNELCEVLSFCTEDSLSGSTSNSLSPILVKLARDETSADIMLLAIRAMTYLCDVYP KSSAYLVRHDAVSALCQRLLAIQYLDVAEQCLQALEKLSREQPLACLQAGAIMAVLNYID FFSTSIQRVALSTVVNICKKLPSEGPSPFMDAVPTLCNLLQYEDPQLVENVAICLIRITE RVSQSSEMLDELCKHGLIRQATHFLSLNGRTTLSQPIHNGLIGLLVKLSSGSVVAFRTLY ELNISGILKDLLSTYDLSHGMSSSHVVDGHCYQVYEVLKLLNELLPTSARNQDAPQLSEK ESYLINQPELLQKFGMDILPLLIQVVNSGANLYICYGCLSVINKLIYLSTSDMLVELLKN ANISSFLAGVFTRKDPHVLISTLQIAELILQKFSDNFLDSFIKEGVFFAIDALLSPEKCS LVTLNKCSKLVFPVSSETRLLSEFSQKSASKEVLRCLCYAFPSSSPGSDNGSCMLEKDSV YSLAKHVRYKYFAPELCDPEKSLTDVLQKLRTFSASLSDLMNMSLDACAPDQHEESFYGV MNQVMEKLSGTEPISTFEFIESGILKSLMTYLSNDRYLRQKDELVATKGDIYAVEKRFEV FARLLFSSPDPFSRDLPIITLIRRLQSSLSTLENFPVILSHIPKQRNSYATVPYERHTAY PCMRVRFVRDKEETSLGDCSEDAFTVDPFSSLDAIEGYLWPKVNAKGTRHIKFATGVECQ SECAPSSASSSQGGSQNAGELESISTDLPELKADEVNLTQPEPEREPSNEQANPGTSLDE TYADTVEDVEAQSEEDTEMEEQYHSSCSNDDTSPKLFFYLEGKQLERSLTLYQAILQQQM KEQEIVIGSKLWSKMYTLTYRKAVGQESAHKEGGDLAESSAVSDKAGVYALYASLFSSMF PCELSSDLEKSNPIYDIVYLLKSLESMNKFIFHLMSRQRICAFAEGRINDLDAFQIAVTQ VPQNEFLSSKLTEKLEQQMRDGLAVSVGGMPLWCNQLMASCPFLFSFEVKCKYFRLAAFV PLLGQSPSPSHSDSGMTSDRRQSSGGLPRQKFLVFRNRILDSAAQMMDLHAYQKVLLEVE YDEEVGTGLGPTLEFYTLVSHEFQKSGLGMWREDGGFFTTGISHAEDTGILICPCGLFPR PWSSTMDASDGTQFSEVIKKFTLLGKIVGKALQDGRVLDLHFSKAFYKLILGQDLGLYDI QSFDPVLGRTLLEFKALVERKRFLESVHGENPTSEFDSCFRKTRIEDLCLDFTLPGYPDF VLASGFDHKMVNSTNLEEYVSLMADATINSGISRQVEAFKSGFNQVFPIEHLQIFTEEEL ERLLCGERDSWAFNELLDHIKFDHGYTASSPPIVNLLEIIHELDQEHRRAFLQFVTGAPR LPPGGFASLNPKLTIVRKHSSNSADLDLPSVMTCANYLKLPPYSSKEKMKEKLVYAIKEG QGSFHLS NT seq 4704 nt NT seq  +upstreamnt  +downstreamnt atggaaagtcgtggccaaaagcgttccgagattgatgatgaattgccggctgataagagg gcctgtagttcattggagtttaggccgagtacatcaagctcgtctcaaacccctttgaat tctgtgagctccacgcccgaaaacaatgatcagaacaatgatcatgctgatcatatggat actgaatccgagggaggagaacccgagaaggattcagcttatgattcctgtgatgatgag gaggaggaagatcacagacacagtgagcttagggacattcagaggcagagagcgcctggt gatcatggaaagtttcagaccataatatcttctctgagtgaagaagtggatctttctcag cagctggttatgctcaacgagttgtgcgaagtgttgtccttttgtacagaggattcactg tctggtagtacatcgaactcgttgtcaccgattctcgttaagctggcaagggatgagact agcgcggatatcatgctattggcaatacgggcaatgacatacttatgtgatgtatacccg aagtcatcagcctacctagtccgacatgatgcagtttctgctctctgccaaagactattg gctatccagtatttggatgtagctgagcagtgtttacaagcattggagaaattgtcacgg gagcaaccactggcatgcttacaggctggggcaataatggctgttctgaactatatagac ttcttctctacaagcatacagagagttgccctttctactgtggtgaacatttgtaagaaa cttccttctgaaggtccttctcctttcatggatgctgttccgacattgtgcaaccttctt caatatgaggatccgcagcttgtcgaaaatgttgccatttgcttgattagaattacggag cgagtgagtcagtcttctgagatgctggatgaactttgtaagcatgggctgattcgtcaa gctacacattttctgagcttaaatggccgaactactctgtctcaaccaattcataatggt ttgatagggctacttgtcaaactttcttccggttcagttgtagctttcaggactctatac gagcttaatataagcggcatattgaaggatttattatctacttatgacctctcacatgga atgtcctcttctcacgtggtggatgggcattgctatcaggtatacgaggttcttaagttg ctaaatgagcttctcccaacttcagcaagaaatcaagatgctccacagttgtcagagaag gaatcttatttaataaatcagcctgaacttctgcaaaagtttgggatggatatacttcca ttgttgatacaggttgtaaactccggtgccaatttatatatttgctatggatgcttgtca gtcatcaacaagttaatttatttgagcacatctgacatgctcgttgaattgctcaagaat gccaacatttcaagttttctggctggagtctttacacgaaaggatcctcatgttttgata tcaaccctacagattgctgagttaatcctgcaaaagttctctgataatttcttggattca tttattaaagaaggtgtctttttcgccattgatgctttgctatcaccagaaaaatgctca ctagtaacactgaataaatgttcgaagctggtgtttccagtgtctagtgaaacaaggctg ctgtctgagttcagtcagaagtctgcttcaaaagaggtcctgagatgcttatgttatgct tttcctagcagttcaccaggatcagacaatggaagttgcatgcttgaaaaggattctgtt tatagtcttgcaaagcatgttagatacaagtattttgcaccagaattatgtgaccctgag aaatcattaactgatgttcttcagaagcttagaactttttctgcttcattaagtgatttg atgaacatgtccttggatgcttgtgctcctgatcagcatgaagagagcttctatggtgta atgaatcaagtaatggagaagcttagtggaacagaacccatttccacttttgaattcatt gaaagtggaattctgaagtccttgatgacctacttgtccaatgaccggtatttacgacag aaggatgaacttgttgctactaaaggtgacatctatgctgtagaaaaaagatttgaggtg ttcgcgaggctattattttcttcgccagatccgttctctagggacctgcccattataaca ttgatacggagattacaaagctcactatctactttggaaaatttccccgttatcttgagc catatacccaaacaaaggaactcctatgctactgttccgtatgagcgacacactgcatat ccatgtatgagagttcggtttgttagagacaaggaagagacttcccttggtgattgctct gaagatgcttttacagttgaccctttttcttcattggatgctattgaaggatatctgtgg cctaaagtcaatgcaaaaggaaccaggcacatcaaattcgctacaggagttgagtgtcaa tcagaatgcgcaccatcaagtgccagctctagtcaaggagggagtcaaaatgctggagag ctggagagcatatccacagacttgcctgagttgaaggcagatgaggtcaatttgacacag ccggaacctgaacgagaacccagtaatgaacaggcaaatcctggaacatctttggatgaa acttatgctgatactgtggaggacgtagaagctcaatctgaggaagacacagagatggaa gaacagtatcattcatcttgtagcaatgatgatacttcaccaaaattgttcttttacctt gaagggaaacagctagaacggtcattgacattgtatcaggcaattcttcaacaacaaatg aaagaacaagaaattgtcattggttcaaaactgtggagtaaaatgtacacattgacatat agaaaagctgtaggtcaagaaagtgctcataaagaaggtggtgacctagcagagagttcc gctgtatcagataaagctggggtgtatgcgttgtatgcttcacttttctccagcatgttt ccttgtgagctttcttctgacttggagaagtcaaatcctatctatgacattgtatatctg ctcaaaagcttggaaagtatgaacaagtttatttttcatctgatgtctcgtcaaaggata tgtgcttttgctgaagggagaatcaatgacttggatgcatttcagatagcagttacccaa gtgccacagaatgaatttttaagcagtaaactgactgaaaagcttgaacagcagatgcgg gatggtttggctgtgtccgttggtggtatgcctttgtggtgtaatcagttaatggcatca tgtccttttttgtttagttttgaggtcaaatgcaagtatttccgcttggctgcctttgtt ccattactgggccagtctccttcaccatctcatagtgattcaggtatgacaagtgatagg cgacaaagctctggtggcttacctcgacaaaagtttttagttttccgcaaccgcattctg gattctgctgcccaaatgatggacctgcatgcctatcagaaggtacttcttgaggtggaa tatgacgaagaagttggtactggtcttggaccgacgctcgaattctataccctggttagt cacgagtttcagaaatctggcctaggcatgtggagagaggatggtggatttttcaccact ggtataagccatgccgaggatactggaattttgatatgtccttgtggtctctttcctcgt ccttggtcatctactatggatgcatctgatgggacacagttcagtgaagtaatcaaaaag ttcacgcttttagggaaaattgtaggaaaagcacttcaggatgggagggtcttggatctg cacttctccaaagccttctataaactaattcttggacaggaccttggtctgtatgacatc cagtcgtttgatcctgtgcttggaaggacattactagagttcaaggctcttgtagaaagg aaaaggtttttggaatctgtacatggagaaaatccaacatctgagtttgattcgtgcttc aggaaaactagaattgaggatctttgccttgattttacacttcccgggtaccctgatttt gttcttgcatccgggtttgatcataaaatggtaaattccacgaacttggaagagtatgtt tcacttatggcggatgcaactataaattctggaatttctagacaagtggaagcttttaag tctggttttaaccaggttttccccatagaacatcttcagattttcactgaagaagaacta gagcgtctgctatgtggagaacgtgattcttgggctttcaatgagctccttgatcatatc aaattcgaccatggttacactgctagcagtcctcccattgttaatttgctggaaatcatc cacgagcttgaccaagaacatcgaagagcgttcctgcaatttgtgactggggcgcctcgc ttacctccaggaggttttgcatccctcaatccgaagttaactattgttcgaaagcactct agcaactcggcggacttggacctaccgagtgtgatgacttgtgcaaactatcttaagttg ccaccatactcatcgaaagagaagatgaaggagaaactcgtttatgccattaaagaaggg cagggatcattccacctttcatag

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