Fragaria vesca (woodland strawberry): 101305135
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Entry
101305135 CDS
T02666
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101305135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101305135
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101305135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
101305135
NCBI-ProteinID:
XP_004310064
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Position
Un
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AA seq
397 aa
AA seq
DB search
MFGAQSSSSPFGAQTSSSPFGAFGTPSSNFGTPASTSAFGTPSSAPSFFTPSSTPAFGTP
TTSSFSTGGAFGFNSAFSTQTQQQQQTSPFQQQAPSAGGFGTQNLFGTPQQQPQQTPSFQ
SPFPSQLTTQMAPVAPLPYSLADRDIQAIVDAYKDEPGNPKYGFKHLLFSVTDPQFRVKP
AGVSDIMWAEAMGKLEGLSSTDRERLWPELVQGFKDLSQRLKLQDEVILSDAERLQMTQS
NVKMLQRHFQADTIPRIERMRQKQQGLERRLLRVMRILEALEGKGFRLPLMKGEADLAEK
LAAITRQLKGSGAELSSRVQNLRTISRVQANSFGAGGFVSLPGSTRIHEQSLADMQEVLQ
QQTEAIARLGNVLKRDIRDMEIIMAEEDPDTTDIMCH
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaatcgtcgtcttctcccttcggagcccagacgtcctcttctcccttc
ggagccttcggcactccatcttcaaacttcggtactccggcttcaacctccgccttcggg
actccgtcgtcggcgccgtccttcttcactcctagttccaccccggccttcggaactccc
accacgtcgtcgttttccaccggcggcgccttcgggtttaacagcgcattctcgacccag
actcagcagcagcagcaaacgtcgccgtttcagcaacaagctccctccgccggtggattt
gggacgcagaatctgttcggtacaccgcagcaacagccgcagcagacgccgtcgtttcag
agtccctttccttctcaattgaccactcagatggctcccgtggctcctctcccttactct
ctcgccgatcgtgacattcaggctattgttgacgcttataaggatgagcctggaaacccc
aaatatggctttaagcatttgctgtttagcgtaactgatccgcagtttagggtgaagcct
gctggtgtatcagatataatgtgggcggaggctatggggaagcttgaaggtctatcgagt
accgacagagaaaggttgtggcctgagcttgttcagggttttaaggatctttcgcaacgc
ctgaagctccaagatgaagtcatactttcagatgccgagagattgcaaatgacccaaagc
aatgtcaagatgctacaaagacattttcaagctgacactattcctcgaattgaaagaatg
agacagaaacagcaaggtcttgaaaggcgcctgttgagggtaatgagaatactggaggca
ctagaaggcaagggtttccgattgcctttaatgaaaggggaagctgacttggctgagaag
ttagctgcaataactagacagttgaaaggatctggagcagagctgtctagcagggtacaa
aacctgcgaactatatcccgtgtccaagcaaattcttttggtgctggtggttttgtttct
cttccaggatcaaccagaatacatgaacagagtcttgctgatatgcaagaggtcttacaa
cagcagactgaggctatcgcgagacttggcaatgttttgaagcgtgatattagggatatg
gagattataatggcagaggaggatccagacactacagatatcatgtgccattaa
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