Fragaria vesca (woodland strawberry): 101305221
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Entry
101305221 CDS
T02666
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101305221
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101305221
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101305221
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101305221
NCBI-ProteinID:
XP_004289183
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Position
LG1:10241074..10243630
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AA seq
570 aa
AA seq
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MESYVGAMRSYCRVLDEKILLIKRNKILVLCAIALSLDPLFCYILVVHDDKKCLGLDRTL
RTIAIVSRSVIDFLYILHIIFQFCATRSVNPVDILAILPLPQVLIFAIIPKLNNLRVLKA
TRSLNFIFIFQYVLRFLRICSLLKKDLGASGILAKSTWANLFFFMLASHVIGAFWYLFSI
ERKATCWIEACSHVGVHCSLYCNDTYKASLYLNDYCSKNSTSFDFGIYVDALASGVVDSA
DIVQRISYCFWWGLQNLSSLGQGLKTSTYVWEIYFSIFILISGLLSFAFLIGNVQAYLLS
EVAKSEERRVRVEQMRLKRQEMESWRPFLSFPENLREQILQNIECKLQENILVDVHNFLP
HLSMDLRKDTIRHLGMDLFKKCPAFDKWDRRLLDAMCDSLKPVIYTEESYIFQERGTVDA
MHFIAQGRLMRLTTYGATTEAFLYRYLGYGDYCGEELITWAFDPHSSPIELPSSIATVQS
LSKVLALVLKADDLKLIASQFRHLHDIHHARHTFRVYSNQWRTWAACYIQRVWRRYCKMK
LEKSLEQQNGRLKEALAKDGTSSSSLGDNI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttatgtaggagcaatgagatcttattgccgagttttggatgaaaagatacta
ttaatcaagcggaataagatacttgttctgtgtgctattgctctctcattagaccctctg
ttctgttatatcctggtcgttcatgatgacaagaagtgccttggtttggacagaactttg
cgtaccatagctattgtttcgcgatcggtcatcgacttcttgtacatattgcatataatt
tttcaattctgtgctactcgttctgttaatccagttgacattcttgccattcttccactt
cctcaggtgctaatttttgctatcattccaaaacttaacaacttgagggttttaaaagca
acgaggtcattgaattttatatttatctttcaatacgtgctgaggtttcttcggatttgc
tcgttgttgaaaaaagatctgggggcttctggcatcctggctaaatctacttgggctaat
ctcttcttttttatgcttgccagccatgtcattggagcgttttggtacttgttttcgata
gaaaggaaagcaacttgctggatagaagcctgcagtcatgttggtgttcattgttcttta
tattgcaatgatacatacaaagctagcctctatctgaacgattattgctctaaaaattcc
acatcttttgattttggaatatatgttgatgcccttgcatctggagttgtggattcagcg
gatattgtacaaaggatttcttactgtttctggtgggggctgcaaaatctgagctctctt
ggtcaaggcctcaaaacaagtacctatgtgtgggaaatctacttctccatcttcatctta
atttctggtctgctatcatttgcatttcttattggaaatgtgcaggcatatttgctgtca
gaagttgcgaaatcagaggaaaggagagtaagagttgagcaaatgagattgaagaggcaa
gagatggagtcatggaggcctttcctttccttccctgagaatcttagggagcagatcttg
caaaacattgaatgcaaattacaagaaaatatactagttgatgtgcacaattttcttccc
catctatccatggacctcaggaaagatacaatacgacatcttggcatggatttatttaaa
aagtgtccagcgtttgacaaatgggataggcgactgctggatgcaatgtgtgatagtctc
aagccagtaatctatacagaggaaagttacatttttcaggagagagggactgtggatgca
atgcacttcattgctcaaggaaggttaatgagactaacaacttatggtgcaacaactgag
gcattcttgtacagatatctgggctatggtgactactgtggtgaagagctcatcacctgg
gcatttgatccccactcgtcacctattgaacttccctcatccatcgcaactgtccagtct
ctaagtaaagttctggcacttgttttaaaagcagatgacttgaagctcatagcctcccaa
ttccggcaccttcatgatattcaccatgcccgccacacattccgggtttactcaaatcaa
tggagaacgtgggcagcttgttacatacaaagagtgtggcgccgttattgcaagatgaaa
cttgaaaagtctttggaacagcagaatggaaggttgaaagaagcactggcaaaggatggg
actagctcctcaagtctaggtgacaacatataa
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