Fragaria vesca (woodland strawberry): 101305416
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Entry
101305416 CDS
T02666
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03020
RNA polymerase
fve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101305416
09124 Replication and repair
03420 Nucleotide excision repair
101305416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101305416
03400 DNA repair and recombination proteins [BR:
fve03400
]
101305416
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101305416
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101305416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Mob_Pre
Tup_N
Motif
Other DBs
NCBI-GeneID:
101305416
NCBI-ProteinID:
XP_004289695
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Position
LG2:1892813..1896082
Genome browser
AA seq
118 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG
YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSNFEAEVAKHSMQVDY
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccagaccgatacgagcgatttgttgttcctgaagggacaaaaaaggtgtcg
tatgagagggataccaagatcataaatgctgcatcatttacgatcgagagagaggatcac
actattggcaacatccttcgcatgcagctgcaccgggatgaaaatgttttatttgctggc
tacaagctccctcacccacttcagtacaagatcattgtcaggattcacacaaccagccag
tcatcaccaatgcaggcatataaccaggctattaatgatcttgacaaggaactcgaccat
ttgaagagtaattttgaggccgaggtagcaaagcattcaatgcaagtggactactag
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