Fragaria vesca (woodland strawberry): 101305698
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Entry
101305698 CDS
T02666
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
fve04141
Protein processing in endoplasmic reticulum
fve04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101305698
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101305698
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101305698
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
101305698
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101305698
03009 Ribosome biogenesis [BR:
fve03009
]
101305698
03110 Chaperones and folding catalysts [BR:
fve03110
]
101305698
04131 Membrane trafficking [BR:
fve04131
]
101305698
03051 Proteasome [BR:
fve03051
]
101305698
03029 Mitochondrial biogenesis [BR:
fve03029
]
101305698
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101305698
Protein phosphatases and associated proteins [BR:
fve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
101305698
Spliceosome [BR:
fve03041
]
Complex B
Other components
Prp19 complex
101305698
Complex C
Prp19-CDC5 complex
101305698
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101305698
Chaperones and folding catalysts [BR:
fve03110
]
Heat shock proteins
HSP70 / DNAK
101305698
Membrane trafficking [BR:
fve04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
101305698
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
101305698
Proteasome [BR:
fve03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
101305698
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
101305698
Exosome [BR:
fve04147
]
Exosomal proteins
Proteins found in most exosomes
101305698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DACNG
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
101305698
NCBI-ProteinID:
XP_004307259
LinkDB
All DBs
Position
LG7:13347083..13349875
Genome browser
AA seq
649 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFNDPSVQGDIKHWPFKVVAGPAEKPMIVVSYKGEEKQFSA
EEISSMVLTKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKHKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFY
TSITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNQKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKK
KVESKNALENYAYNMRNTIKDDKIASKLDAADKKKVEDAIEQAIQWLDGNQLAEAEEYDD
KVKELEGICNPIIAKMYQGGAPPDMAGGIDEEVPPSGGSGAGPKIEEVD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaaaggagaaggacccgccatcgggatcgacctcggaaccacctactcttgc
gtcggagtgtggcagcacgaccgtgtcgagatcatagccaacgaccaggggaacagaacg
acgccgtcctatgttgccttcactgacactgagcggttgattggtgacgccgccaagaac
caggtcgccatgaaccccgtcaacaccgtcttcgatgcgaagaggttgattggtagaaga
tttaatgacccatctgttcagggtgatattaagcactggcctttcaaggtcgttgcgggt
cctgctgaaaagccaatgattgtggtttcatacaaaggtgaagagaagcaattttctgct
gaggagatttcgtctatggttctcaccaagatgcgggagattgcagaggcctatctcggc
tcaacggtgaaaaatgcagttgttactgtgccggcttatttcaatgattcacagcgtcag
gctacgaaggatgctggggtcattgctggtcttaatgtgatgcgtattatcaatgagcct
actgctgcagccatagcttatggtctcgacaagaaggcaaccagtgtaggggagaagaat
gtcttgatttttgatcttggtggagggacatttgatgtctctctgcttacaattgaagag
ggtatttttgaagtcaaggctactgctggtgatactcatttgggaggagaagattttgat
aacaggatggtgaatcactttgttcaggagttcaagagaaagcataagaaggatataact
ggaaatccaagagctcttcgaagattgaggacggcttgtgagagagcaaagaggactctc
tcatccactgctcaaacaaccattgagattgactctctgtatgagggtgttgatttctat
acatctatcactcgtgcaagatttgaagagctgaacatggatttgtttaggaagtgcatg
gagccggttgagaagtgtttgagagatgcaaagatggacaagagcagtgtccatgatgtt
gtgctggtgggtggttctactaggattccaaaggtgcaacagttgcttcaagacttcttt
aatggaaaggagttgtgcaaaagcatcaaccctgatgaggctgtagcttatggtgcagct
gtgcaagctgctattttgagtggtgagggcaatcagaaggtgcaggacctattgcttctg
gatgtcactcctctgtccttgggtttggaaactgctggaggtgttatgactgttttgatc
ccaaggaatactaccattccgactaagaaggagcaggtgttctctacatattccgacaac
caacccggtgtcttgattcaggtctttgagggtgagagggctagaacccgcgataacaac
ttgttgggcaaatttgagctctctggcattcctcctgctccaaggggtgttccccagatt
accgtgtgcttcgacattgatgccaacggtatcctcaatgtctctgctgaggacaagaca
actggacagaagaacaagattaccatcacaaatgacaagggaagactatccaaggaggat
atcgagaagatggtacaggaggctgagaaatacaaatcagaagatgaagagcacaagaag
aaggttgagtccaagaatgccctggagaattatgcctacaacatgaggaacacaattaag
gatgacaagattgcttcaaagctcgacgcagccgacaagaagaaggttgaggatgcaatc
gaacaggcaatacaatggcttgatggcaatcaacttgcagaggcagaggagtatgatgac
aaggtgaaggagcttgagggcatttgcaacccgatcattgctaagatgtaccagggtggt
gctcctcctgacatggctggtggcatagatgaagaggttcctccttcaggtggcagtggc
gctggtcctaagattgaagaagtagactaa
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