Fragaria vesca (woodland strawberry): 101305757
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Entry
101305757 CDS
T02666
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101305757
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Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_16
TPR_2
TPR_19
TPR_CcmH_CycH
TPR_14
Motif
Other DBs
NCBI-GeneID:
101305757
NCBI-ProteinID:
XP_004299524
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Position
LG5:10025516..10028839
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AA seq
682 aa
AA seq
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MNRRLVLAVAVFSLFAVSISARPFVLVLSPDDVLNSPAAPDGDGAATDPTTQNDSADWDE
FGDSAYPQSEDELDPGSWRPIFEPDPLKPEPYDQSDEQYYSTVSKLIKSVSSGDTALMEE
AVSEIEESASRGVPHARSVLGFLIGSGQMRKQNKAKAFTYHYFAADGGNMQSKMALAYTY
FRQDMFEKAVKLYAELAEAAVNSFLISKDSPVIEPVRIHNGAEENKEALRKSRGEEDEDF
QILEYQAQKGNSLAMYKIGLFYYFGLRGLRRDHAKALSWFLKSVDKGEPRAMEFLGEIYA
RGAGVERNYTKALEWLSLASKQELYSSYNGMGYLYVKGYGVEKKNYTKAKEYFEKAAENR
DAGGHYNLGVLYLKGIGVKRDVKLACQYFIAAANAGQPKAFYQLAKMFHTGVGLKKNLPR
ATVLYKLVAERGPWSSLSRWALESYLKGDVGKAFFLYSRMAELGYEVAQSNAAWILDKYG
EDSMCMGESGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGQGTERDYERAAEA
YKHARSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDPAAKLPVTLALASLWI
RKNYANGFLVHLIDSLPEVYPKLEEWIDNVLLEEGNATILTLFVCLLTVLYLRERQRRHA
VVVPAGVAMPPNPNELVAPVPN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagattggttttggcggtggcggttttctctctcttcgccgtttcgatttca
gcgcggccgtttgttctggttctttctccagacgacgtcttgaacagccccgccgcgccc
gacggcgacggagcggcaaccgatccgacgactcagaatgactcggccgactgggacgag
ttcggcgactcggcgtatccgcaatccgaggacgagctcgacccgggctcgtggcggccg
atcttcgaacccgacccgctcaagccggagccgtacgaccagtcggacgagcagtactac
tccacagtgtcgaaattgatcaagtccgtcagctccggcgacacggcgctgatggaggag
gcggtctccgagatcgaggagtccgcttcccgcggggttcctcacgcgcggtccgtgctg
gggtttctgattggtagtggacagatgaggaagcagaacaaggccaaggcgttcacgtat
cactacttcgccgcagacggcggcaatatgcagtcgaagatggctctggcttatacttac
tttaggcaagatatgtttgaaaaagcggttaagctttacgcggagttagccgaggcagct
gtgaatagcttcttgatctccaaggactctccggtgattgagccggtgaggatccacaat
ggagcagaagagaataaggaggcattgaggaagagccgaggtgaagaagatgaggacttt
cagattctggagtatcaggctcagaaggggaattctcttgcaatgtataagattggactg
ttttactatttcgggctgagagggttgcgccgggaccatgccaaggcattgtcgtggttt
ctcaagtctgtggataagggagagcctagggcgatggagtttcttggtgagatttatgct
agaggagctggggtggagaggaattacaccaaggctctcgagtggctttcattagcatct
aaacaagagctttattcgtcttataatgggatgggatatttgtatgttaaaggttatgga
gtggagaagaagaactacactaaggcaaaagagtactttgagaaggctgctgagaatcga
gacgctggcgggcactataacttaggagtactttatctcaaagggattggggtaaaaaga
gatgtgaaacttgcatgtcaatacttcattgcggctgctaatgcaggtcaaccaaaggca
ttctaccagcttgcaaagatgtttcatactggagtggggcttaagaaaaatcttcccagg
gccactgtgttatacaagctagttgctgaaagggggccatggagttccttgtccagatgg
gcactggagtcgtacttaaagggggatgtggggaaggcatttttcttgtactcaaggatg
gctgagttaggctatgaggtagcacaaagtaatgctgcatggattcttgacaagtacgga
gaagatagcatgtgcatgggagaatctggcttttgtacagatgcagaaagacatcagcgg
gcacattctttgtggtggcaagcatctgagcagggtaatgaacatgctgctttgctgatt
ggggatgcatattactatggtcagggtactgaaagggattatgaacgtgcagcagaggct
tacaagcatgctaggtcccaatctaatgcacaagccatgttcaacctgggctacatgcat
gagcatggacaaggattacctttggatctccatctagccaaacgttactatgatcaagcc
ttagagattgatccggcagcaaagttaccagtcacactagcccttgcaagcttatggata
cgaaagaattatgccaatggatttctggtccatttgattgactcgttgcctgaagtctat
ccaaaattggaagagtggatagataatgtgttgctggaggaaggaaatgcaacaatattg
actctttttgtttgtctcctcactgtcctatatctccgtgagcgacaacgcaggcatgct
gtagtagtccctgctggagtggctatgccgcccaatccaaatgaacttgttgcgcctgta
cccaattag
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