Fragaria vesca (woodland strawberry): 101305776
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Entry
101305776 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101305776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101305776
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101305776
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101305776
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Nop14
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
101305776
NCBI-ProteinID:
XP_004303331
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Position
LG6:complement(18194006..18197242)
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AA seq
355 aa
AA seq
DB search
MTRFSLGGDEDGGGPSSPRLKRRRLILRTAATIATGDRRRGGGLQAVEDESASSESEDEE
DESESEEEEESEGDQEHQRQLRTNFELGSASAAQQIALASTTTATDRSISITLADPDVLD
CPICCESLTVPVFQCENGHIACSSCSTKVKNKCPSCSWPIGYNRCRAIEKVLESIRISCQ
NIKYGCKEWMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQHFSSNHLNSATRFLY
NCSFSITINFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSIQPRFMGGFFYDLTAKR
KGCLLRLQSFTTSTQSHVRSPTSSGSLIIPGDFFSSCGQLKLDICIWRNGAGGGS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacgagattctcgttaggcggtgatgaagatggaggaggaccgagcagccccaggctt
aagagacgtcgtcttattcttcgcacggctgctaccatcgccacaggggaccgacgccga
ggaggagggctacaggctgttgaggacgaatcagcgtcatcggaatctgaagatgaagag
gatgaaagtgaatccgaagaagaagaagaatcagaaggtgatcaagagcaccagcgtcag
cttcggaccaacttcgagttgggttctgcctccgcagctcaacagattgctcttgcttcc
accaccaccgccacggacaggtccatttccattaccttggccgacccggatgtgctcgat
tgccccatttgctgtgagtccttgaccgtccccgtcttccagtgtgaaaatggtcatata
gcttgctcctcctgcagcacgaaggttaaaaataaatgtccctcctgttcctggcccatt
ggttataatcgttgtcgtgccattgagaaagttctggaatcaattagaatttcttgccaa
aacatcaagtatggttgcaaagaatggatgacatgcgataataaaaatgaacatgaaaag
ggttgtatgcattcaccttgttcatgcccccattcaggctgcaactttgtctcttcaacg
aagcaattataccaacatttcagcagtaatcatttgaactctgcaactcgcttcctgtac
aactgcagcttttcaattacaataaactttaatgacaagtttgttgttcttcaagaagaa
aatgatggcatgttgtttattcttgacaatgaatctgaaatcataggaaatatggtgaga
cttagtagtattcaacctagatttatgggaggatttttctatgatcttactgctaaaaga
aaaggatgtctactcagattacaatccttcacaaccagcactcaaagccatgttcgcagc
cctacttcatctggctcccttataatcccaggcgattttttcagttcatgtggccagctc
aagttggatatctgcatatggcgtaatggggcgggagggggtagctga
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