Fragaria vesca (woodland strawberry): 101305778
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Entry
101305778 CDS
T02666
Name
(RefSeq) oligouridylate-binding protein 1C
KO
K13201
nucleolysin TIA-1/TIAR
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101305778
03041 Spliceosome [BR:
fve03041
]
101305778
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101305778
Spliceosome [BR:
fve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101305778
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
101305778
NCBI-ProteinID:
XP_004303712
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Position
LG6:24783904..24788947
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AA seq
425 aa
AA seq
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MQHQRLKQQQQQQALMQQALLQQHSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVG
NIHTQVTEPLLQEVFASTGAVESCKLIRKEKSSYGFVHYFDRRCAALAIVSLNGRQLFGQ
PIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRS
RGFGFVSFRNQQDAQSAINDLNGKWLASRQIRCNWATKGAGTNEDKQSSDGKSVVELTNG
SSEDGKEPTNNEAPENNPQYTTVYVGNLAPEVTQLDLHRHFYALGVGVIEEVRLQRDKGF
GFVRFSTHGEAALAIQMGNTQSNLFGRQIKCSWGSKPTPPGTISNPLPPPAAAVPLPGLS
ATDLLTYERQLAMSKMGGVHALMHPQGQIPLKQGAMGMGTAGASQAIYDGGFQSVAAAQQ
LMYYQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggctgaagcagcagcagcaacagcaagctctgatgcaacaggctctt
cttcagcagcattctctctaccaccctggcctccttgctccgcctcagatagagccaatc
ccaagtggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtatgttggt
aatatccatacccaggtgacagaaccacttcttcaagaggtctttgcaagtacaggtgct
gttgaaagctgtaaacttataagaaaggaaaagtcatcctatgggtttgtccactatttt
gatcgcagatgtgctgctctggcaatagtatctctcaatggaagacaactgtttggacag
cctatcaaagtgaattgggcatatgccagtggtcagagggaagatacatcaggacacttc
aacatttttgtaggtgatctcagtcctgaggttactgatgccacattatttgcttgcttt
tctgtatattccagttgttcagatgcaagagttatgtgggatcagaagacagggcgctct
agaggctttggatttgtctcattccggaaccaacaggatgctcaaagtgcaattaatgac
ttaaatggtaagtggcttgccagtagacagatacgttgcaactgggcaacaaaaggtgct
ggcaccaatgaggataagcagagttcagatggcaagagtgtggtggaactaactaatggt
tcttcagaagacggaaaagagccaacaaacaatgaggctccggagaacaacccccaatat
accactgtctacgttggcaatcttgctccggaggtcactcagcttgatcttcaccgtcac
ttttacgctcttggtgttggagtaattgaagaggttcggcttcagcgtgataaaggtttt
ggttttgtcaggttcagtacccatggtgaggcagctctcgctatacagatgggaaatact
cagtcgaatttgtttggaagacaaataaagtgttcttggggcagcaagcctactccacca
ggaacaatctcaaacccactccctcccccagctgcagcggtgcctttaccaggcctctct
gcaacagacctcttaacctatgagcgtcaactagcaatgagcaagatgggtggtgtccat
gccctcatgcacccccagggacagatccctcttaagcagggggccatgggaatgggcaca
gctggagcaagccaggctatatacgatggtggattccagagtgttgctgctgcccagcag
ctcatgtactatcagtaa
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