Fragaria vesca (woodland strawberry): 101305823
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Entry
101305823 CDS
T02666
Name
(RefSeq) endoribonuclease Dicer homolog 3-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fve03036
]
101305823
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101305823
microRNA pathway
RISC loading complex
101305823
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
PAZ
dsrm
Dicer_dsRBD
DND1_DSRM
DUF5040
Motif
Other DBs
NCBI-GeneID:
101305823
NCBI-ProteinID:
XP_004292050
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All DBs
Position
LG2:1927825..1930614
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AA seq
931 aa
AA seq
DB search
MIMNSKRKEPTSGAGTTKRKELHGTTSIRALSGTRGEKLDGAVFYGYKFDFPCDIATELY
SGLIFLIESELAEDVGNTELELYLKSSRVKASISSCGEVHLDGEQMAKAKLFQEFFFNGL
FAKLFHPTGKEREFLLKKETRSLWRQSYMYLVLPHEKLNQSWGINWSGINSCVSAVEFLK
QNVLLGAQHCNGDPRKSLSSTSCSSGSGIFHLADCSVDEKNLNDMVVVAIHNGNVYSVFE
VLSDTSAESPFESSRYSSYADYFHKRYGVVLKYPGQPLLRLKQSHNPHNLLLNFNGEVGR
VNGKEHSMYAHMPPELLVYTGVRRDVLKSFYLLPSLIHRLESLILASQLREEISSGHPSS
LQISSSLILEALTSIRCSEDFSMERLELLGDSVLKYAIGCHLFLKYPNKHEGELTSLRQS
VICNANLHKLGIGRSLQGYIRDGAFDPRRWVGPGQLSVRPVPCECGVDSLEVPVDSKFQT
SSEVVVGKCCDKGHRWMGSKTFSDCVEALIGAYYVSGGLPAAVHFMKWLGIDVELEPTLV
LEAIATASLHSYNATVDDEIGILESKLGYVFSTKSLLHKATTHASEQGYSYERLEFLGDC
VLDLLITWHFYQNHKDIDPGELTDLRAASVNNGYFAQVAVRHNLQQHLQHCSGFLQSQIT
EYANSLSEHDNDIKLQGTKGPKALGDMVESIAGAILIDTELNLDEVWRVYRPLLSPIVTP
EKLELPPLRELIELCGSLGYFYKEETEKKGETVHAKLSVQLKDDLLIGEGNERTKKAAKG
EAAHRLLKELEKRDITYSGSAKKGKRNADLVDDSSPTKRKKTETLPIENIDRKLSSLKNE
DVPVIKAINMKKGGPRISLFELCKKLQWQMPSFKSTEKECSFVSNITLYIPNLGEIECTG
DPKSDKKSSLDSAALAMLLDLRRQGKIIIGG
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaattcaaaacgcaaagagcctacttctggtgcaggaacaactaaaaggaag
gaactacatggcacaactagcattcgcgcgctgtctggaacaaggggagaaaaacttgat
ggtgccgtcttttatggctataaattcgacttcccatgtgacatcgctactgagctatat
tctggacttatttttctgatcgagtcggagcttgctgaggatgtggggaataccgagttg
gagctttacttgaaatcaagtagagttaaggcttctatttcttcctgtggggaagttcat
ttggatggagaacagatggcaaaagcaaagctcttccaggaatttttctttaatggattg
tttgcaaaattgttccatccgactggaaaagagagagagtttttacttaagaaggaaaca
agaagcttgtggaggcaatcatacatgtatttggttcttccacatgagaaattgaatcaa
tcttggggaataaattggagtgggattaattcttgtgtttctgccgtagaattcttgaag
caaaatgtactgctaggtgctcagcattgcaatggtgacccaaggaagtcattatcaagc
acaagttgctcatctggatctgggatattccacttagctgattgctcagttgatgaaaaa
aatctcaacgatatggtggtagtggccatccacaatggaaatgtatattctgttttcgag
gttttgagtgacacatctgccgagagtccttttgaatcatcacgatacagctcctatgct
gattacttccacaaaagatatggggttgtgctcaagtatccaggtcaacctctgttgcgg
ttgaagcaaagccataatccacataatcttctcctgaacttcaatggtgaagttggccgt
gttaatggaaaggaacatagtatgtatgcccatatgcctcctgagcttctagtctatacc
ggtgttcgaagagatgttttaaagtcattttatctactaccatcattgattcatcgcttg
gaatccttgatcttagccagccaactcagagaagagattagtagtggtcatcctagcagc
ttacagatatcaagctcattgatcctagaagcactaacatcaattcgttgcagtgaagat
ttttccatggagcgtttggaattgcttggcgattcagtcctaaagtatgctataggctgc
caccttttcctaaaatatcccaacaaacatgaaggagaattaacttctctgcggcagtct
gtaatttgtaatgcaaacctgcataaactaggaataggccgaagcttacagggatatatt
cgtgatggtgcttttgatccgcgccgttgggttggtccgggacagctctctgtaagacct
gttccttgtgagtgtggagtggatagtttagaagtaccggtagatagcaagtttcaaacc
agcagcgaggttgtggttggcaagtgctgtgataagggccatagatggatgggttcaaaa
acattctctgattgtgttgaagcacttataggagcttattatgtaagtggtggattgcct
gctgcagttcattttatgaagtggctcggcattgatgtagaacttgagccaaccttggtt
ttggaagcaattgctactgcatcacttcattcttacaatgctacagtggatgatgagatt
ggaatcctagagtcaaagcttggttatgtgttttctaccaaaagtctcctacataaggca
acaacacatgcatctgagcaaggctactcttatgaaagactagaatttcttggtgattgt
gtgttggatctgcttatcacatggcatttctatcagaaccacaaagatattgatccaggc
gagttgacagacttgcgtgcagcttcagttaacaatggatactttgctcaagttgctgtt
agacacaaccttcaacagcatctacaacattgttctgggtttcttcaaagtcaaataaca
gaatatgctaactccctatctgaacatgacaatgatatcaaactacaaggcacaaaaggc
cccaaggctcttggagacatggtggaaagtattgccggggcaatactaatcgacactgag
ctaaatctcgatgaagtgtggagagtatacagaccattattatctccaattgtgactcct
gaaaaacttgagctgcctcccttgcgtgaactgattgaactatgtggctcgcttggctac
ttttataaagaagaaactgaaaagaagggtgaaacagttcatgcaaagcttagtgtacag
ctgaaagatgatttgttaattggggagggtaatgaaaggactaagaaagctgcaaaagga
gaagcagctcatcgtttattgaaggagcttgagaaaagagacattacgtattccggttct
gctaagaagggaaaaaggaatgctgatctagttgatgattcatctccaacaaaacgaaag
aaaactgaaaccctgcctatagagaatattgacagaaaattaagtagtctgaaaaatgag
gatgtaccagttatcaaagctatcaacatgaagaaaggaggacctcgaatctcgcttttc
gagctgtgcaagaaattacagtggcaaatgccgagcttcaaatcaacagaaaaggaatgc
agttttgtatcgaatataaccttgtacatacctaacttgggcgagattgagtgcacagga
gatcctaagtcagataagaagagttcactagactctgcagcacttgccatgcttcttgat
ctcagaaggcagggtaagattatcattggtggatga
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