Fragaria vesca (woodland strawberry): 101305973
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Entry
101305973 CDS
T02666
Name
(RefSeq) uncharacterized LOC101305973
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101305973
Enzymes [BR:
fve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
101305973
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101305973
Prokaryotic type
101305973
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
101305973
NCBI-ProteinID:
XP_004306381
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All DBs
Position
LG6:complement(37662741..37665672)
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AA seq
503 aa
AA seq
DB search
MAKPVSLSLLFLRPTTLSRLLPHPHPTLTRARTRPLLSLPCRPNTPSFSTTSTPFPLQYD
LIINRPTQSSLDRLPARAANPDKNNSSISDSDSSPEKPNELGFDNWLDQKLSDDPMEKSK
RKYYNKRRKRMYGGDSEEEEEKRREEERLVELKPEVVEFNTLHKREEELYFYDTFAYPWE
KDKHYKMVYRLEKKYYPDQCLDKAFLEPGEKNPPNKKKIEHDDKGMVFFEEGKVREPVAA
KDVKEKKVEEFFKCLKKGPSEEEGEPYLLTRSSELPPRWDGPYGTVVLVNKPKGWTSFTV
CGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKVVDSYQGMTKGYSGVFRLGEATST
WDADSPVIQREPWEHIKDEDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIE
LSPRRISIYQFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKALGSCAHLTALRRDSI
GEYSADNAWDFKELEDAITKTYF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaccagtctcactgtctcttctcttccttcgccccactacactctcccgcctt
ctccctcacccccacccaactctcacccgcgccagaacccgccccctcctctctctccca
tgccgccccaatacgccgtcgttttcaaccacctccactccattccctctccagtacgac
ctcatcatcaaccgccccacccagtcctccctcgaccgccttcccgcccgcgccgccaat
cccgataaaaacaactcctccatttccgactccgattcttcgccggagaagcccaacgaa
ttaggcttcgacaactggctggaccagaagctcagcgacgatccgatggagaagtcgaag
aggaagtactacaacaagaggaggaagcggatgtacggcggcgattcggaggaggaggag
gagaagcggcgggaggaggagaggctggtggagctgaagccggaggtggtggagttcaac
actttgcataagagagaggaggagctttacttctacgacacgtttgcgtatccgtgggag
aaggacaagcattacaagatggtgtaccggctcgagaagaagtactatcctgatcagtgt
ctagataaggcctttctcgaacccggcgaaaagaatccacctaataagaagaagatagag
catgatgataaaggaatggtgttctttgaggaggggaaggtgagagaaccggttgcggcg
aaagatgttaaggagaagaaggtggaggagtttttcaagtgtttgaagaaaggccccagt
gaagaggagggggagccgtatttgctgacgaggagtagtgagctgcctcccaggtgggac
gggccgtatgggactgtggttttggtgaacaaaccgaaaggatggacatcttttacagtt
tgtgggaagctgcggcgcctggtcaaagtgaagaaggtagggcatgccggaacgcttgat
ccgatggcaactggattgttaattgtatgtgttggtaaagctactaaggttgtggacagc
tatcagggtatgaccaagggttacagtggagttttccgtttgggggaggctacttcgact
tgggatgctgattcaccggtcattcagcgcgagccatgggagcatatcaaagatgaagat
ataaagaaagctgctgcatccttttgtggagagatatggcaagtacctccaatgttttct
gccatcaaagttggaggtgaaaagatgtatgagaaggcaaggagaggagaaagcattgag
ctctcacccagacggatatcaatatatcagtttgatattgagcgcagcttagatgacaga
caaaacttgattttccgggttacttgctctaaagggacatatattagatctctatgtgcc
gatttggggaaagctctcggcagttgtgctcatttaactgctcttcgaagagattcaatt
ggggaatattctgcagataatgcatgggacttcaaagagctggaggatgcaattaccaaa
acgtatttctag
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