Fragaria vesca (woodland strawberry): 101306126
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Entry
101306126 CDS
T02666
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101306126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101306126
04121 Ubiquitin system [BR:
fve04121
]
101306126
03036 Chromosome and associated proteins [BR:
fve03036
]
101306126
03400 DNA repair and recombination proteins [BR:
fve03400
]
101306126
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101306126
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101306126
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101306126
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101306126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_2
zf-HC5HC2H
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
zf-HC5HC2H_2
zf-RING_5
RTT107_BRCT_5
zf-RING_10
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
101306126
NCBI-ProteinID:
XP_011460683
LinkDB
All DBs
Position
LG3:8640751..8646898
Genome browser
AA seq
1097 aa
AA seq
DB search
MGNLAHLEKMGRELKCPICLSLFSSAVSLNCNHVFCNACIVKSMKSGSNCPVCKIPYQRR
EVRPAPHMDNLVGIYKNMEDASGTNIFMTQSAPSTKSADGKQQVEDENPDEQDPPRLSQN
RAGNQKTVRGKRSGKAKSNLKNSNSVSVKPSFPTKKRVQVPQSLSETPTRPKQLLGDLIE
EKSKQDSTTLKEKPVFNERGEPVLSPFFWLSDKDAENLSEPSTGDQLDDIPSPNVPTFSD
IKDSDDEDCTRLSPLGEVQGKSSNAADIFDSEMFEWTQMPCSPELFASPSKMQVSVHHVA
DNDQIDRIQVKELKEASQNKKIAEQVTAEKARSRNSRQNSGNLILQPYLPHDNTEDANHQ
LFGNQSNKRGRQARNITKSKCATSHMDLVEDRNANFKGSEDSYQEHGCKNRDSYVAKAGK
RSKKAHPSRLATKPTSESVCTLSTGAERQNEGCAKKGLTELPPSLEKDDGNDEAFAQGKA
KKICTKINAKNPMRRSARSKKQKVVSMPNMLEEVSGIEKQANTNVTNEHSHVNVPTDENR
KVSDVKNKSMKLAREAKSCDHELKFNKKAQVSSGDDSEDKEVSEIKKQANRSAPTEVSII
LPTNVNRELSEVRKRAREAKSCNRELKITKKVKVSFDGSSKNEAVIEIGEGHHNVNENGD
QPTEKSKGDSNSRLFTDGSSMQKLPTLRNDVALRRCDAIASKIQCAFCLSSEESEASGEI
VHYYNGKPVAADHNGGSKVIHSHRNCTEWAPNVYFEDDIAMNLEAELTRSRRIKCCCCGI
KGASLGCFEKSCRKSFHVSCAKMTPECRWDTDNFVMLCPIHSSSKLPNESSESEARRKKS
TPRKQPGDDCKKVHVKQDSNTSQDLKFCGSSKKLVLCCSTLTSAEREYVAEFERLSGLTV
LKKWDSTITHVIAPIDKNGACRRTLKVLMGILEGKWILSMGWIKACMEAMKLVNEEPYEI
SIDIYGIRDGPRLGRLRLQNKEPKLFDGLKFYFMGDYVPSYKGYLQDLVIAAGGTVLHRK
PVPESQKGSSGSPLECRTFIIYSLELPDQCHPSKKGTIFNQRLADAKSVASSAGANVASN
SWILNSIAACKLQRLSE
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatctggcgcacctcgagaaaatgggcagagaacttaagtgccccatttgtttg
agtctatttagttctgctgtttcgctgaattgcaaccatgtcttctgcaatgcttgtatt
gtgaagtcaatgaaatcgggctccaattgtcctgtttgtaagatcccatatcagcggaga
gaggttcgccctgctcctcatatggacaatttggttggtatttacaaaaacatggaggat
gcttcgggtactaacatatttatgactcaaagtgcaccatcgactaaatcagcagatgga
aagcagcaagttgaagatgagaatcctgatgagcaagatcctcctagactttctcagaat
agagctgggaaccagaaaaccgtcagagggaaaagatcagggaaagctaaatccaaccta
aagaactccaattctgtttcagttaaaccttcatttccaaccaagaaaagggttcaggtt
ccacaatctctttcagaaaccccaacacggcctaaacagttactgggtgatttgattgaa
gaaaagtcaaagcaggattcaacaactctgaaggagaagcctgtttttaatgagagggga
gaaccggtgctttcacctttcttttggttgagtgataaagatgctgaaaacttgagcgag
ccttctaccggagatcagcttgatgatattccatctccaaatgttcctactttcagtgat
atcaaggactcggatgatgaagactgtacaagattgagcccactgggcgaagtgcagggg
aaatcttccaatgctgcggacatttttgatagtgaaatgtttgaatggacgcaaatgcca
tgctcccctgagctctttgcaagtccttctaagatgcaggtatctgttcatcatgttgca
gataacgatcaaattgatagaattcaagtgaaggaactaaaagaagcctcacaaaacaag
aaaatagctgaacaagtcactgctgaaaaagcaaggtccagaaattctagacagaatagt
ggaaacttgatcttgcagccttatcttccacatgataatactgaagatgctaatcatcaa
ctttttggcaatcaatctaacaagagaggaagacaagcaagaaacataactaaaagtaag
tgtgctacaagtcatatggacctggttgaggacagaaatgctaattttaagggttctgaa
gactcttatcaagaacacggctgcaagaatagggacagttatgtggccaaggctggcaaa
aggagtaagaaagctcatccatctcggctcgcaactaaaccaacatctgaaagtgtttgc
accctctctactggggcagaaaggcagaatgaaggctgtgctaagaaggggttaactgaa
ttacccccctcactagaaaaggatgacggcaatgatgaagcttttgcccaggggaaggct
aagaaaatctgtacaaagataaatgccaagaacccaatgcgtcgctcagcgaggtcaaag
aaacaaaaggtggtctctatgcctaacatgcttgaggaggtatcaggaatcgagaaacaa
gcgaatacaaatgttacaaatgagcactcccatgtaaatgtccctacagatgagaacagg
aaagtctctgatgtcaagaataaatccatgaaacttgctagagaagccaagtcatgtgat
catgaattgaaattcaacaaaaaggcccaagtttcgtccggtgatgactcagaggataag
gaggtatcagagattaagaagcaagcaaataggagtgctccaactgaggtgtccataatt
ctccctacaaatgttaacagggaactctcagaagttcgaaaacgagctagagaagccaag
tcatgtaatagagaattgaaaattaccaaaaaggtgaaagtttcttttgatggcagttca
aaaaatgaggctgttattgagattggagagggtcatcataatgttaatgaaaacggtgac
caacccaccgagaagagcaaaggcgattcgaatagtagactttttactgacggatcatca
atgcagaagcttcccacattgaggaatgatgtggctttgaggaggtgtgatgccattgct
agtaaaattcaatgtgccttttgtctttcatcagaagaatcagaggcatcaggagagata
gttcactactataatggcaagcctgttgctgcagatcacaatggagggtccaaggttata
cattcacacaggaactgcactgaatgggctcccaacgtatattttgaagatgatattgct
atgaatcttgaagctgagttaactagaagtcgtagaattaaatgttgttgctgtggaatt
aaaggagcatctcttgggtgttttgagaagagttgtcgcaagagctttcatgtcagctgt
gcaaaaatgactcctgaatgtcgatgggatacagataattttgttatgttatgccccatt
cattcctcttctaagttgccaaatgaaagttctgaatctgaagcaaggaggaagaagagc
acccctagaaaacaacctggtgatgactgtaaaaaagttcatgttaaacaagacagcaac
acctctcaggatctgaaattttgtggatcatccaagaagttggttctctgttgttcaact
ctcacaagtgcagagagggaatatgtagcggaatttgaaagattatctggacttacagtc
ttgaagaagtgggactctactatcacacatgttattgcaccaatagataaaaatggagca
tgtagaagaaccctcaaagtattgatgggaatcttggaggggaagtggatactgagcatg
ggatggattaaagcttgcatggaagccatgaaactagtgaatgaggagccttatgaaatt
agcattgacatttatggaatcagggatggccctcgacttggtagactaagactacaaaac
aaggaaccaaaactttttgatgggcttaagttttacttcatgggagattatgtaccttcg
tacaaggggtatctacaagaccttgtaatagctgctggaggaactgttttgcacagaaag
cctgttccagagagtcagaaaggctcatctggaagtcccctcgaatgtcgaaccttcatc
atttatagtcttgagttacctgatcaatgtcatcctagcaagaagggtacgattttcaat
caaagactggctgatgcaaagtctgtggcaagttctgctggagccaatgtagcaagcaat
tcatggattttgaactccattgctgcctgcaagctacaacgtctttctgaatag
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integrated database retrieval system
