KEGG   Fragaria vesca (woodland strawberry): 101306211
Entry
101306211         CDS       T02666                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:fve04812]
    101306211
Cytoskeleton proteins [BR:fve04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     101306211
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st eIF2A Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 101306211
NCBI-ProteinID: XP_004293499
LinkDB
Position
LG3:3153579..3161492
AA seq 803 aa
MAKRAYKLQEFVAHSDNINCLSIGKKACRLYVTGGDDHKVNLWTIGKPTALMSLTGHTSP
VESVAFNLAEVLVLAGASTGATKIWDLEEAKMVRTLTGHRSSCSAVEFHPFGEFFASGST
DTNLKIWDIRKKGCIHTYKGHTQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEPTGVRSIAFHPDGRT
IFSGLDDRLKVYSWEPVISHDSVEMGWSRLADLCIHDGKLLGCSYYRNSIGVWVADVSLI
KPYGDGSTPEQNDCFDEKSHVKLHGIMENVETGIRGPGLRCMSPDYDSKDIKNIYVDSAC
GKPVTTQRINSSKVLPPLELKETGAKKQIPAAGSLPKSNEKMVNKSLAVPSIVPRSSPNA
KDSANTGRESVAFSKTRRGMLLRPAHVRSPSDSKVDMEKLPFAVESGTFSSMTSKLDGAV
GLSSQIKTIAEDSDRESCKEKHSVIKSVEEKFEAVLSLKRPSDQETKNGLLSNSKELSPV
KVVNGVAVVPGRTRTLVERFERRERFSSNDDQATGIIGPVIPEDQASSISSPAIPEDQAT
SICSPMTIEMEKTFTVQREEEPQISGRHMSSAKNDPTEDLMQTHDAFLSTLRSRLTKLQV
VRHFWERNDIKGAVTAIRKLPDHAVQADVISVLLDKLDILTLDLFSCLLPVLLGLLDSKI
ERHANVSLEMLLKLVAVFGPVIQSTISAPPAVGVNLQAEQRLECCNQCSIYLQKIQKILP
VFVRKGGVLARCARELNLILQQS
NT seq 2412 nt   +upstreamnt  +downstreamnt
atggcgaagcgcgcgtacaagctgcaggagtttgtggcgcattctgacaatattaactgt
ctaagtattgggaagaaggcgtgccgactttatgtcaccggcggtgatgatcacaaagtc
aatctatggacaattggcaaacctaccgcgctaatgagtctcactggtcatacaagtcca
gttgaatctgtagcttttaatttagcagaagttttggtgcttgctggagcttctactggt
gcaacaaaaatatgggatctggaggaagcgaagatggttcgcacacttactggacacaga
tccagctgttctgctgttgaatttcatccatttggtgagttctttgcttctggttccacg
gacactaatctaaagatctgggacattagaaagaagggatgcatccacacatacaaaggt
catactcaaggcattagtactattaagttcactcccgatggtcgatgggttgtctctggt
gggtttgataatgttgtaaaggtgtgggatctaactgctgggaagctcttgcatgatttt
aaattccatgaaggacatattcggtctatagattttcatccccttgagtttctcttggcc
acaggttcagcagacagaaccgtgaaattctgggatttggaaacttttgaattgattgga
tctaccaggcctgagcctacaggagtacgctcaattgctttccaccctgatgggaggacg
atattttctggattggacgacagattgaaggtttattcctgggagcctgtaatatctcat
gattctgttgaaatgggatggtcaagacttgctgacctatgcattcatgatgggaagcta
ctgggatgctcttactatcgaaattctattggagtctgggttgctgacgtttcgcttatt
aagccatatggagatggttcaacacctgagcaaaatgactgtttcgatgagaaatctcat
gtaaagttgcacggaatcatggagaatgtagagactggtataaggggtccggggttgcgc
tgtatgtctcctgattatgactcaaaggacataaagaacatatatgttgattctgcatgt
ggaaagccagttaccacacagagaattaattcttcgaaagttttacccccattggaatta
aaggaaactggtgctaagaagcagattcctgcagcggggtcactcccaaagtctaatgaa
aagatggtcaataaatccttggctgtgcctagcattgtacctcgaagcagtcccaatgca
aaagactcggctaacactggaagagaatctgttgcattttcaaaaactaggcgtggtatg
ttgctcagaccagctcatgtgcgaagcccatcagatagcaaagttgacatggagaaacta
ccgttcgccgttgaatccggaactttcagcagcatgacgagtaaattggatggtgcagtg
ggtctcagttctcagatcaaaactatagcagaagatagtgatagagagtcctgtaaggaa
aagcattctgtaatcaagagtgtagaagagaaatttgaagcagtattatcactcaagagg
ccctctgatcaggaaactaaaaatggactcctcagtaacagcaaggaattgagccctgtt
aaagttgtcaatggagttgctgttgtaccaggaaggactcgcaccctggttgagcgattt
gaaaggagagagagatttagtagcaatgatgatcaagcaactggcataattggtcctgtg
atacctgaagatcaagcaagtagcatatctagtcctgcgatccctgaagatcaagcaact
agcatatgtagtcccatgacaattgaaatggagaaaacattcaccgtgcagcgagaagag
gaacctcaaatttctgggaggcacatgtcatctgcgaaaaatgatcctactgaagatctg
atgcaaactcatgatgcattcctaagtacccttcgatcccgcctgacaaaactgcaggtg
gtgaggcatttttgggaacggaatgatattaaaggtgctgtcactgctatcagaaagctt
ccagatcatgcggtacaagcggatgtgattagtgttctcctggataaactggatattttg
acattagatctcttttcgtgtttgctgcctgtgcttctgggcttgcttgatagcaaaatt
gagaggcatgcaaatgtgtcattggagatgttgttgaagcttgtagcagtctttggccca
gtgatacagtctaccatttcagcacctccagcggtcggagtcaatctgcaggcagagcaa
aggctggagtgctgcaaccaatgctctatatacctgcaaaagattcagaaaattctccca
gtctttgtaaggaaagggggtgtgctggcaagatgtgctagagaattaaatctaattctt
caacagtcgtaa

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