Fragaria vesca (woodland strawberry): 101306211
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Entry
101306211 CDS
T02666
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fve04812
]
101306211
Cytoskeleton proteins [BR:
fve04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
101306211
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
101306211
NCBI-ProteinID:
XP_004293499
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Position
LG3:3153579..3161492
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AA seq
803 aa
AA seq
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MAKRAYKLQEFVAHSDNINCLSIGKKACRLYVTGGDDHKVNLWTIGKPTALMSLTGHTSP
VESVAFNLAEVLVLAGASTGATKIWDLEEAKMVRTLTGHRSSCSAVEFHPFGEFFASGST
DTNLKIWDIRKKGCIHTYKGHTQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEPTGVRSIAFHPDGRT
IFSGLDDRLKVYSWEPVISHDSVEMGWSRLADLCIHDGKLLGCSYYRNSIGVWVADVSLI
KPYGDGSTPEQNDCFDEKSHVKLHGIMENVETGIRGPGLRCMSPDYDSKDIKNIYVDSAC
GKPVTTQRINSSKVLPPLELKETGAKKQIPAAGSLPKSNEKMVNKSLAVPSIVPRSSPNA
KDSANTGRESVAFSKTRRGMLLRPAHVRSPSDSKVDMEKLPFAVESGTFSSMTSKLDGAV
GLSSQIKTIAEDSDRESCKEKHSVIKSVEEKFEAVLSLKRPSDQETKNGLLSNSKELSPV
KVVNGVAVVPGRTRTLVERFERRERFSSNDDQATGIIGPVIPEDQASSISSPAIPEDQAT
SICSPMTIEMEKTFTVQREEEPQISGRHMSSAKNDPTEDLMQTHDAFLSTLRSRLTKLQV
VRHFWERNDIKGAVTAIRKLPDHAVQADVISVLLDKLDILTLDLFSCLLPVLLGLLDSKI
ERHANVSLEMLLKLVAVFGPVIQSTISAPPAVGVNLQAEQRLECCNQCSIYLQKIQKILP
VFVRKGGVLARCARELNLILQQS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgcgcgtacaagctgcaggagtttgtggcgcattctgacaatattaactgt
ctaagtattgggaagaaggcgtgccgactttatgtcaccggcggtgatgatcacaaagtc
aatctatggacaattggcaaacctaccgcgctaatgagtctcactggtcatacaagtcca
gttgaatctgtagcttttaatttagcagaagttttggtgcttgctggagcttctactggt
gcaacaaaaatatgggatctggaggaagcgaagatggttcgcacacttactggacacaga
tccagctgttctgctgttgaatttcatccatttggtgagttctttgcttctggttccacg
gacactaatctaaagatctgggacattagaaagaagggatgcatccacacatacaaaggt
catactcaaggcattagtactattaagttcactcccgatggtcgatgggttgtctctggt
gggtttgataatgttgtaaaggtgtgggatctaactgctgggaagctcttgcatgatttt
aaattccatgaaggacatattcggtctatagattttcatccccttgagtttctcttggcc
acaggttcagcagacagaaccgtgaaattctgggatttggaaacttttgaattgattgga
tctaccaggcctgagcctacaggagtacgctcaattgctttccaccctgatgggaggacg
atattttctggattggacgacagattgaaggtttattcctgggagcctgtaatatctcat
gattctgttgaaatgggatggtcaagacttgctgacctatgcattcatgatgggaagcta
ctgggatgctcttactatcgaaattctattggagtctgggttgctgacgtttcgcttatt
aagccatatggagatggttcaacacctgagcaaaatgactgtttcgatgagaaatctcat
gtaaagttgcacggaatcatggagaatgtagagactggtataaggggtccggggttgcgc
tgtatgtctcctgattatgactcaaaggacataaagaacatatatgttgattctgcatgt
ggaaagccagttaccacacagagaattaattcttcgaaagttttacccccattggaatta
aaggaaactggtgctaagaagcagattcctgcagcggggtcactcccaaagtctaatgaa
aagatggtcaataaatccttggctgtgcctagcattgtacctcgaagcagtcccaatgca
aaagactcggctaacactggaagagaatctgttgcattttcaaaaactaggcgtggtatg
ttgctcagaccagctcatgtgcgaagcccatcagatagcaaagttgacatggagaaacta
ccgttcgccgttgaatccggaactttcagcagcatgacgagtaaattggatggtgcagtg
ggtctcagttctcagatcaaaactatagcagaagatagtgatagagagtcctgtaaggaa
aagcattctgtaatcaagagtgtagaagagaaatttgaagcagtattatcactcaagagg
ccctctgatcaggaaactaaaaatggactcctcagtaacagcaaggaattgagccctgtt
aaagttgtcaatggagttgctgttgtaccaggaaggactcgcaccctggttgagcgattt
gaaaggagagagagatttagtagcaatgatgatcaagcaactggcataattggtcctgtg
atacctgaagatcaagcaagtagcatatctagtcctgcgatccctgaagatcaagcaact
agcatatgtagtcccatgacaattgaaatggagaaaacattcaccgtgcagcgagaagag
gaacctcaaatttctgggaggcacatgtcatctgcgaaaaatgatcctactgaagatctg
atgcaaactcatgatgcattcctaagtacccttcgatcccgcctgacaaaactgcaggtg
gtgaggcatttttgggaacggaatgatattaaaggtgctgtcactgctatcagaaagctt
ccagatcatgcggtacaagcggatgtgattagtgttctcctggataaactggatattttg
acattagatctcttttcgtgtttgctgcctgtgcttctgggcttgcttgatagcaaaatt
gagaggcatgcaaatgtgtcattggagatgttgttgaagcttgtagcagtctttggccca
gtgatacagtctaccatttcagcacctccagcggtcggagtcaatctgcaggcagagcaa
aggctggagtgctgcaaccaatgctctatatacctgcaaaagattcagaaaattctccca
gtctttgtaaggaaagggggtgtgctggcaagatgtgctagagaattaaatctaattctt
caacagtcgtaa
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