Fragaria vesca (woodland strawberry): 101306237
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Entry
101306237 CDS
T02666
Name
(RefSeq) biotin carboxylase 1, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00061
Fatty acid biosynthesis
fve00620
Pyruvate metabolism
fve00640
Propanoate metabolism
fve01100
Metabolic pathways
fve01110
Biosynthesis of secondary metabolites
fve01200
Carbon metabolism
fve01212
Fatty acid metabolism
Module
fve_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
101306237
00640 Propanoate metabolism
101306237
09103 Lipid metabolism
00061 Fatty acid biosynthesis
101306237
Enzymes [BR:
fve01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
101306237
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
101306237
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Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_LDMS
RimK
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
101306237
NCBI-ProteinID:
XP_004299766
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Position
LG5:complement(13438172..13444098)
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AA seq
533 aa
AA seq
DB search
MDATMPICKTVSPTPGLFFGKTGEIRSSQCSFMVGNKVSFLRQRAQGAQISYRSRKHAGT
LHATCRADKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAA
SNQSYLVVPNVLSAAISRKCTMLHPGYGFLSENASFVEMCKEHGINFIGPKPESIRIMGD
KSTARETMKQAGVPTVPGSDGLLKSTEEGMKLADEIGYPVMIKATAGGGGRGMRLAKEPE
EFVKLLQAAKSEAAAAFGNDGVYLEKYVVNPRHIEFQVLADKYGNVVHFGERDCSIQRRN
QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQV
EHPVTEMISSVDLIEEQIRVAMGEKLRMTQDDIVLRGHSIECRINAEDAFKGFRPGPGRI
TAYLPAGGPFVRMDSHVYPDYVVPPNYDSLLGKLIVWAPTREKAIDRMKRALNDTIITGV
PTTIEYHKLILEIEDFKNGKVDTAFIPKHEEELAAPQQVLPASPPKELASASA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaccatgcccatttgcaagactgtttctccaactccggggttattttttgga
aaaactggagagatcaggagttcccaatgtagcttcatggtgggaaataaagttagcttt
ttgaggcagagagctcagggtgctcaaattagttatagatcaaggaagcatgcgggaact
ctccatgctacatgtcgtgctgataaaatcctggtggcaaatagaggagaaattgcagtt
cgtgttattcgaacggcgcatgagatgggcataccctgtgtggctgtctactcaacaata
gacaaggatgcgcttcatgtcaaattggctgatgagtcggtttgtattggtgaagcagca
agcaatcaatcgtaccttgtagttccaaatgttttatctgctgccatcagtcgtaaatgt
acaatgcttcatcctggatatggtttcctatctgagaatgcatcttttgttgaaatgtgc
aaagaacatggaatcaactttattggtcctaagcctgaaagtatccgtattatgggtgat
aaatccactgcaagagaaacaatgaagcaagcaggtgttccaactgtacccggaagtgat
ggattactaaagagcacagaggaaggaatgaagcttgctgatgagattggttatcctgta
atgatcaaggcaacagcaggtggtggaggacgtggcatgcgtcttgctaaagagcctgag
gagtttgtaaagttgttacaggcagcaaagagcgaggctgcagctgcttttggaaatgat
ggagtttatttggaaaagtatgtcgtaaatcctagacacattgaatttcaggttcttgca
gataagtacggtaatgttgttcactttggagaacgtgattgcagcatccagagaaggaac
caaaagcttctagaagaagcaccctctcctgcattaactccagaactgcggaaagccatg
ggtgatgccgcagttgctgccgcagcatctattggttacattggtgttggaaccgttgag
ttccttctggacgaaagaggttccttttacttcatggaaatgaacactaggattcaggtt
gagcatcctgtgacagaaatgatttcctctgttgacttgattgaagaacaaattcgtgtt
gctatgggagaaaaactcagaatgactcaggatgatatcgttctccgaggacattcaatt
gaatgtcgtatcaatgcagaagacgcttttaaaggattccgacctgggccaggtagaata
acagcttacttacccgctggaggtccatttgttagaatggatagtcatgtttatcctgat
tatgtggttcctccaaactatgattcccttcttggaaagcttattgtgtgggcaccaaca
agagaaaaggcaattgatcggatgaaaagagctcttaacgacactattataacaggggtt
ccaacaactattgaatatcataagctcatcctggagatagaggatttcaaaaatgggaag
gttgataccgcttttattcccaagcatgaagaggagctagcagcgccccaacaagtgttg
cctgcatccccaccgaaagaactagctagtgcaagtgcatag
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