Fragaria vesca (woodland strawberry): 101306440
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Entry
101306440 CDS
T02666
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101306440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fve03032
]
101306440
03400 DNA repair and recombination proteins [BR:
fve03400
]
101306440
DNA replication proteins [BR:
fve03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101306440
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101306440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
PHD
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
101306440
NCBI-ProteinID:
XP_004301808
LinkDB
All DBs
Position
LG5:complement(24995127..25000195)
Genome browser
AA seq
1367 aa
AA seq
DB search
MDSRAPPPQTFLGVRFVLLGFDPINERQVRSKLVDHGGVDVGIYSPNCTHIIVDRITYDH
PVCVAARKEGKTVVTALWVHHSYDVAMPLDAASVIYRPLKQLNGIPGARNLLMCLTGYHG
QDRDDIMTMVALMGAQFSKPLVASKVTHLICYKFEGEKYRLAKQLPQIKIVNHRWLEDCL
RDWVLLREDNYNQSGYELEIMGAEARDSEDEAEDTSIKQSVGRSVSKSCHNIQAGSPGPF
HIPKSEGEAPMVPQNSLEKSISQNEDKFDQASRFSEVHVSKVPSPHDGCKFKDAMLVGHN
DLHHTTPDSKMKDDMASTFGSAERPAPHSDRKLSHSRQSPWKSTLPLYSGDKSSYGSRSS
KGPIRKLSVNDDFASSSFRTEENEKNGSNCAEALLKVNHVQNEAESSGILPQKRTPDHSY
ASFKIQKTSYDPESSIVRSPSSDKPAKEIPASLIDGSYKTTIDRNDENSLDKNMTRLNAA
ETLGAVVSPTKSYNLTEKSLTTDEPSSLTLISEIRQDGNVNKKSPLSFQRLRKSPISSKR
GIGDLAVEESTTIASGTVEPQNQQQDVQGLSPRNKMSVTNKSNDLANLDLHKGGTDVLIK
SDRKMMLSKKTLGSRPKLTSANQKFSVHLDEDATLNVATGDINAADQEKSPSAIKHDLLS
PDVNVKALKMAEVKDVTPSGDVSENKIDSLDDDTEAPEEEDQHELESVCEAKTTEIKAAV
VMEEKSEGVQHTSNISDPCVHGAAMASGENMLENEQETVSVLLGSTSKGVDDKGKKNNGR
KHPLGKTKLKTVPAVTDKMISDEGVSKDLSKHSDPCVHSDAMASEGNMQENEQGETVSEQ
VESTSKGDGVIGKKNSGKKGHLVKTKLKTVPAVSDKMNSEKGVSKDIINYSEPCVRGDAT
ASVENIKGNEQGESVSMLVESTSKGDGAKGKKNSGKKRPLGRTKLNTSPALTETENNEGT
GMEDEGLESKRRSAHKSKPEDSSELKENRPIACGDQNISKDNEQAGKSHVKCNFTPMEIN
QKLAKISRNSSIQEVKASDRVNTQPEWFILSGHQLERKEFQKIIKRLKGRCCRDSHNWSY
QATHFIIPEPIRRIEKFFAAAASGRWILKSDYLAASNQAGKFVAEEPYEWYESGLSEDGT
INLEAPRKWRLLKERTGHGAFYGMHIVIYGDCIAPRLDTLKRVVKAGDGTILATCPPYTR
FLNSGVDFAIISPGMPRVDMWVQEFLKHEIPCVVADYLVEYVCKPGYPLERHVLYNTHAW
AEKSFGRLQSKAEEVLVVVEEEEETPTEDSGSSDIPCVVCGSCDRGEVMLICGNESGSVG
CGIGTHIDCCSPPLEDIPEGDWFCPKCCSQSKNTSNPSKKRKKGKSK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggacagccgtgctccgccgccccaaacttttctgggcgtccgtttcgttctcctgggt
ttcgatcccatcaacgaacgccaggttcgatctaagctggtagatcacggtggggtcgat
gttggtatctattccccgaattgcactcacatcattgtggataggattacctatgatcat
cctgtttgcgttgctgctcgaaaggaaggcaaaacggttgtcaccgctttgtgggttcat
catagttatgatgttgcaatgccccttgatgccgcttctgttatatacagacctctcaaa
cagttgaatggtattcctggtgccaggaatttattaatgtgcttgactggatatcatgga
caagatagagatgacattatgacaatggttgctttaatgggtgctcaattttctaaacca
ttggtggcaagcaaagtcactcatctcatttgctataaatttgaaggggagaagtataga
cttgccaaacaacttcctcagatcaaaattgtcaatcatcgctggttggaagattgctta
agggattgggttcttcttcgggaagataattataaccagagtggctatgagttggagata
atgggggctgaggctagggattctgaagatgaggcagaagacacctctataaagcaatct
gtggggagaagcgtgagtaagagttgccacaatatacaggctggttctccaggtcctttt
cacattccgaagtcagagggagaggcccctatggttccccaaaattctctggagaaatct
atttcacagaatgaagataaatttgatcaagcttcaagattttctgaagttcacgtttcc
aaggttcctagccctcatgatggatgtaaatttaaagatgccatgcttgttggacataat
gatctccatcacacaactccagattctaagatgaaagatgacatggcatctacttttgga
tctgctgaaaggccggcccctcattctgataggaaactaagccactccaggcaatcacca
tggaaatccacacttccattgtactcgggagataaatcaagctatggaagtaggtcttct
aaagggcctattcgcaagttaagtgtcaatgatgattttgcttcttcttctttcaggacg
gaagaaaatgaaaaaaatggttctaattgtgcagaagctctcttgaaagtaaatcatgta
cagaatgaagcagagtcaagtggtatattgcctcaaaaaaggacaccagatcattcttat
gcgagcttcaaaatacagaagacgagttatgatccagagtcaagcatcgtgagaagtcca
tcaagtgataaacctgctaaagaaataccagcatctttgattgatggttcatataagact
actattgacagaaatgatgaaaactctctggataagaatatgactcgtttgaatgccgca
gaaaccttaggtgctgttgtgtcaccaacaaagtcatataatcttaccgagaagtcattg
acaactgatgagccttcctccctgactctgatctcagagatcaggcaagatggcaatgtc
aacaagaaatctcctctatcattccagaggttaagaaagtcccccatatccagcaagcgt
ggaattggagatttggcagtggaagaatctacaactatagcgagcggaacagtggaacca
caaaatcagcaacaagacgttcagggtttgtctccaagaaacaaaatgtcagtgactaat
aagtccaacgaccttgctaacttggacttgcataaaggtggaactgatgtgttgataaaa
tctgataggaagatgatgctatccaagaagactcttggttctaggcccaagttaacttca
gcaaaccaaaagttttctgttcacttggatgaagatgccaccttaaatgttgccactggt
gatataaatgcagcagaccaggagaaatccccctctgccataaagcatgatctactttct
ccagatgttaatgtaaaagcattgaagatggcagaggttaaagatgttactccgtctgga
gatgtttctgagaacaaaattgactctctggatgatgacactgaggctcctgaggaagaa
gatcagcatgaattggagagtgtatgtgaagcaaaaacgacagagattaaagctgctgta
gtcatggaagagaaatcagaaggggtgcagcatacatcaaatatctccgatccgtgtgtc
cacggtgctgcaatggcctcaggggaaaatatgctagaaaatgaacaagagacagtttct
gtgctgcttggatcaacgtcaaaaggagttgatgataaaggaaagaagaataatgggaga
aagcatcctttgggtaaaactaagttgaagactgttcctgccgtcactgataaaatgatc
tcggatgaaggtgtctctaaggatttatcaaaacactctgatccctgtgtccatagtgat
gcaatggcctcagaaggaaatatgcaagaaaatgaacaaggagaaacagtttctgagcag
gttgaatcaacctcaaaaggagatggtgttataggaaagaagaacagtgggaaaaagggt
catttggtcaaaactaagttgaagacagttccggccgtcagtgataaaatgaattcagag
aaaggtgtctccaaggatataataaattactccgagccctgtgtccgtggtgatgcaacg
gcctcagtggaaaatataaaaggaaatgaacaaggagagtcagtttctatgctggttgaa
tcaacctcgaaaggagatggtgctaaaggaaagaagaacagtgggaaaaagcgtcctttg
ggtagaaccaagttgaacacttctcctgcattaactgagactgagaacaatgaggggaca
gggatggaagatgaaggacttgaatctaagcgccgcagtgcacacaaaagtaagccagaa
gactcatctgagctgaaggagaacaggccaattgcctgtggagatcaaaatataagcaag
gacaatgagcaggcgggaaaatcacatgttaaatgtaattttactccaatggagatcaat
caaaaattggcgaagatcagtcggaattcttcaatacaagaggtgaaggcttcagacaga
gttaatactcaacctgaatggtttattttgagtggacatcagttggaaaggaaggagttt
cagaaaattatcaagcgcctgaaaggaaggtgctgccgtgattcccataactggtcttac
caggcaacacatttcatcattccagaaccaattcgcaggatagaaaagttttttgctgct
gcagcatctggaaggtggattcttaagagtgattatttggcagctagtaatcaggcagga
aaatttgtggctgaggaaccttatgaatggtacgagagtggcctaagtgaagatggcaca
atcaatttggaggctccaaggaagtggcggctgttgaaagagagaacaggtcatggtgcc
ttttatggaatgcacattgttatatatggtgactgcattgcaccacgtctggatactctg
aagcgcgtggtgaaggctggtgatgggacgatattagcaacttgtcctccttacacccgc
ttccttaactcgggagttgactttgccatcattagcccaggcatgccacgtgttgatatg
tgggtgcaagagtttttaaaacatgagataccctgtgttgtagctgattacttggttgag
tatgtgtgcaagcctggatacccccttgagagacatgtgctatacaatactcatgcttgg
gcagaaaagtcatttggccgtctgcagagcaaggcagaagaggttttggttgtggtggag
gaagaggaggagacacctacggaggattctggtagcagtgatataccctgtgtggtttgc
ggatcttgtgacagaggagaggtgatgctgatatgtggcaacgaaagtgggtctgttggc
tgtgggattggtactcatattgactgctgcagtccgccacttgaagatattccagagggt
gactggttttgtccgaagtgttgtagccaaagcaaaaacaccagtaatccctctaagaag
agaaaaaagggtaagagcaagtga
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