Fragaria vesca (woodland strawberry): 101306611
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Entry
101306611 CDS
T02666
Name
(RefSeq) phytochrome B-like
KO
K12121
phytochrome B
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101306611
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
PAS_8
sCache_3_2
Glyco_transf_7N
Motif
Other DBs
NCBI-GeneID:
101306611
NCBI-ProteinID:
XP_004295077
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Position
LG3:complement(25276670..25281735)
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AA seq
1136 aa
AA seq
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MASASGKAAAQSSSGTSNFRSAGQQQNNHTSTAAAESVSKAVAQYTVDARLHAVFEQSES
GKSFDYSQSMRTTKDSVPEQQITAYLSKIQRGGHIQPFGCTVAVDESTFAVIAYSENARD
LLDLMPQSVPVMERREILTVGTDVRTLFSPSSSTLLEKAFAAREITLLNPIWIHSKISGK
PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQSLPGGDIKLLCDT
VVESVRELTGYDRVMVYKFHEDEHGEVLAESKRADLEPYLGLHYPATDIPQASRFLFKQN
RVRMIVDCHATPVQVIQDEGLMQPLCLVGSTLRAPHGCHSQYMANMGSIASLALAVIING
NDDEAIGGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQLLEK
HVLRTQTLLCDMLLRDTPTGIVTQSPSIMDLVKCDGAALYYQDKYYPVGVTPTEAQIKDI
VEWLLSSHGTSTGLSTDSLGDAGYPGAASLGDAVCGMAAAYITKRDFLFWFRSHTAKEVK
WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQIILRDSFKDAE
TNNLKAVTENRHGDLEIQGIDELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKIAEL
TGLSVEEATGKSLVHDLIYKESEEIVDKLLIHALRGEEDKNVEIKLRTFGPEHDNKPVFV
VVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDD
NTCCSEWNNAMETLTGWSRGDMIGKMLVGEVFGSCCRLKGPDAITKFMIVLHNAIGGSDT
DKFPFSFFDRNGKYVQALLTANRRVNVDGQVIGAFCFLQIPSPELQQALRVQRQQEKQCF
ARMKELAYMCQEIKSPLSGIRFTNSLLGGTELSEDQKQFLETSAACEKQILKIIKDVDLA
SIEDGSLELEKEDFLLGSVINAVVSQVMLLLRERNLQLIRDIPEEVKTLAVYGDQVRIQQ
VLADFLLNMVRYAPSDEGWVEIHVRPILTTISDGHSMVHTEFRLVCPGEGLPPQLVQDMF
HSSQWLTQEGLGLSMCRKILKLMGGDVQYIRESERCYFLVILELPMPQILKRVLTR
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagcaagcggcaaggcggcggcacagtcgtcttcaggcaccagcaatttccgt
tcggctgggcagcagcagaacaatcacactagcacagcagccgcggagtcggtgagcaaa
gcggtggcgcagtacaccgtcgacgcgcggctgcacgccgtgttcgagcagtcggagtcc
ggtaagtcattcgactactctcagagtatgagaaccaccaaagattccgtcccggagcag
caaatcaccgcctacttgtccaaaatccagagaggcggccatatccagcccttcggctgc
actgtcgccgtcgacgagtccaccttcgccgtcattgcttacagcgagaacgcccgggac
cttctcgacttgatgccccagtctgtcccggtgatggaacgccgcgagattctgacggtc
ggcaccgacgtcaggacgctgttctcgccgtcgagctccaccttgctggagaaggccttc
gctgcgagagagattacgctattgaatccaatttggattcactcgaagatttccgggaag
ccgttttatgctatattgcataggattgatgttggggttgtgattgatttggagcctgcg
aggactgaggacccggcgctgtcgattgccggggcagtgcagtctcagaagcttgcggtg
agggcgatatcgaagctgcagtcgttgcctggtggggatattaagctgctgtgtgacact
gtggtggagagtgttagggagcttacggggtatgatagagttatggtgtataagtttcat
gaggatgagcatggggaggtgttggcggagagtaagagggcggatttggagccttatctt
gggctgcattatccggctactgatataccgcaggcgtccaggtttttgttcaagcagaat
agggtgagaatgattgtggattgtcatgccacgccggtgcaggttatacaggatgagggg
cttatgcagcctttgtgcttggttggatcaacgctgcgtgcgcctcatggttgtcattcg
cagtacatggctaatatggggtcaattgcgtcgctggcgttggcggttattattaatgga
aatgatgatgaggctattggtgggaggagctcgatgaggctatgggggttggttgtttgc
catcacacttctgcgaggtgcattccgtttcctctgcgctatgcttgtgagtttctgatg
caggcttttggtctccagttgaatatggaattgcagttggctgcacagttgttggagaag
catgttttgaggacacagacgctcttgtgtgatatgcttcttcgtgataccccgactggg
attgttactcagagtcctagtatcatggatcttgtcaagtgtgatggggcagcactctac
taccaagacaagtactatccagtaggtgtcacacctactgaagcgcagatcaaggacatt
gttgagtggttgttgtcttcacatgggacttcaacaggcttaagcactgacagtttgggt
gatgcggggtaccctggagctgcctcacttggtgatgctgtctgcgggatggctgctgct
tatattactaaaagggactttctgttctggtttcgatcccacaccgcaaaagaggtgaaa
tggggtggagcaaagcatcatcctgaggacaaggatgatgggcagaggatgcatccacgt
tcttcattcaaggcgtttttggaagtggttaaaagccgtagtttgccatgggacaatgca
gaaatggatgccatccattccttgcaaattattttgcgagactcgtttaaggatgctgag
acaaacaatttaaaggctgttacagagaaccggcatggggatctagagattcaagggatt
gatgagctcagctcggtagcaagagaaatggttagattgatagagactgcaactgctccc
atatttgctgtagatgttaatgggcgtataaatgggtggaatgcaaagattgcagagctg
acagggctctcagtggaggaggctacagggaagtccttagttcatgatctcatttacaaa
gaatctgaagaaattgttgacaaacttctcatccacgctttaagaggagaagaagataaa
aatgtagagataaaactgaggacatttggcccagagcatgacaacaagcctgtttttgtg
gtggtaaatgcttgctctagcaaggattacactaataatattgtgggagtttgctttgtt
ggtcaagatgttactggtcaaaaagtggtaatggacaaattcattaacatacaaggtgat
tacaaagccattgttcacagtcccaatcctttgatcccgcccatatttgcttcggatgat
aacacatgttgctcggagtggaacaatgccatggaaacactcactgggtggagccgtgga
gatatgattggaaaaatgttggttggggaggtctttggcagttgctgtcggctcaagggt
ccagatgctataacaaaattcatgattgtcttgcacaatgctattggaggctcagacacc
gacaagtttcctttttcattctttgaccggaatgggaagtatgtgcaagctctcttgaca
gcaaataggagggtgaatgtagacggccaggttattggagctttctgctttttgcagatt
cccagtccagaactgcagcaggctcttagggtccagagacaacaggagaagcaatgtttc
gctaggatgaaagaattggcatacatgtgtcaggaaataaaaagcccactaagtggtata
cgcttcactaactcacttttggggggtacagagctgagtgaagatcaaaagcagttcctt
gagactagtgctgcttgtgaaaaacaaattttgaagattataaaggacgttgatttggct
agcatcgaagatggttctttggagcttgagaaggaagattttttacttggaagtgtcata
aatgctgttgttagccaagtaatgttattgctgagggaaagaaatttacaattgattcgg
gatattcctgaagaagtcaaaacactagctgtttatggtgatcaagtgagaattcaacag
gtcttggctgatttcttattgaatatggtacgttatgcaccatctgatgaaggctgggtg
gagattcatgttcgtccaatcttgactacaatttctgatggacactctatggttcatacg
gaattcaggttggtatgccctggtgaaggtcttccccctcaattagttcaagacatgttc
catagtagtcaatggctgactcaggagggcctaggactgagcatgtgcaggaagatttta
aagctcatgggtggagacgtccaatatatcagagaatcagagagatgttacttcttagtt
attcttgagcttcctatgcctcagatactgaaaagagtgttgactaggtaa
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