Fragaria vesca (woodland strawberry): 101306759
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Entry
101306759 CDS
T02666
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101306759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101306759
03029 Mitochondrial biogenesis [BR:
fve03029
]
101306759
Membrane trafficking [BR:
fve04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101306759
Atg1 complex
101306759
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101306759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
101306759
NCBI-ProteinID:
XP_011470155
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Position
LG7:complement(20600132..20603593)
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AA seq
615 aa
AA seq
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MDFQNSYQPESGKLEQIVSQFLLKSLHIILDSRVPSLHPQDRSGELSFNSQVRKSDKWFN
LVLGDRPAALENLNFWHRNVMDPMIIDIILVHEGSNSSSVDNLFGNSGAGTSVETIIERW
VVQYETPRVVANQTSDSLAYKKTYKKSIVLLRALYSYMRLLPAYRIFRQLSTSRQTYDFD
IIYKVSSLRDPFSRAEEEMMQEFSFAPVEANPGRLSLSVTYRETLSDFHLEPSTPMPPKI
ITDYVGSPATDPLRSFPSSVRSDRPTSFPLGRIRPPSAGPFQRPHSWTSGFHRPPHVGHY
KSVDGSPPVYRASPMSHDVGSPPIDTYTHRAQNYRLPSHSRTPSYDEYQLSPPFSASPSP
SPPTYLSGGSFSPMQTRIRPETAPVSIPNPMGSKGSRYLSPNFSDPSRNSLPPLSLRSTR
NEPSSQESPSGIRAFRKLDGSRTGDMHPGFQKLKDSKDDSGRFSGLLSSSGSPRVGFSRS
SSRLSFQDDIDDCEFSCPFDVDDVDTTNFHVSQNLDGKRASDFSSQSLPIGGKSPGAAVG
VLVHMLRTAPPLRQDSSCYSSHSMKPEHEEGVSTASGFFMPRKTSDALEELRSYREMKDL
LISKSGMRVLTKEEA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaacagttatcagcctgaatcggggaaattggaacagatagtttcccaa
tttcttctgaaaagcttgcatattattttggactctagggtgccttctcttcacccgcag
gatcgcagtggagagctttcgttcaattctcaggtgaggaagagtgacaaatggttcaac
ttagtactaggggaccgtcctgcagctcttgagaatttgaacttttggcacagaaatgtg
atggatccaatgataattgacattatccttgttcatgaggggtcaaattcatcatcagtt
gacaatctgtttgggaactctggggctggtacatcagttgaaacaatcatagagaggtgg
gttgttcagtatgaaactcctagggttgtggctaatcaaaccagtgacagtttagcctac
aagaagacatataagaaatcaattgtacttttacgtgctctttattcatatatgaggctt
cttccagcttataggattttcagacagctaagtacatcacgtcagacttatgattttgat
atcatttacaaggtatcttcactaagagatcccttctcaagggcggaggaggaaatgatg
caggagttcagttttgctcctgtagaggccaatcctggtcgcctgtctttgtctgtgact
tatcgtgaaacactgtctgatttccatcttgagccttcaacacctatgccaccaaagata
attacagattatgttggtagtcctgctactgatccattgagatcttttccatcatcagtg
aggagtgatcgcccaacttcctttccattgggaagaatacggcctccatctgccggacca
tttcagcgtccacacagctggacaagcggcttccatagaccacctcatgttgggcattat
aaatctgtagatggatctccacctgtatatcgtgcatcccctatgtcccatgatgttgga
tctcctcctattgatacatatactcacagagctcaaaactatagacttccaagtcattca
aggactcctagttacgatgagtatcagctttcacctccattttcagcatctccatcccca
tctccaccaacgtacttgtccggtggtagctttagtccaatgcaaacacgaattcgtcca
gaaactgcccctgttagcatccctaatccaatggggagtaagggctctagatacctttct
cccaatttttctgatccaagtagaaattcgcttcctcctttatctctgagaagcacaaga
aatgaaccttcctctcaagagtctccatctgggataagggcatttagaaaactagacggt
tcaaggactggagatatgcaccctggttttcagaagttgaaagacagcaaagatgattcg
ggccggttctcaggattgttgtcctctagtggctcaccacgtgttggattttctagaagc
tccagtagattatcttttcaagatgatatagatgattgtgagttctcatgccctttcgat
gtggatgatgtcgacacaaccaactttcatgtgagtcaaaatcttgatggcaaaagagct
tcggatttttcttcccagtcattgccaataggtggaaagtcaccaggtgctgctgttggc
gttcttgttcacatgctgagaacagctccgcccctgcgccaagattcaagctgttactct
tctcactccatgaagcctgaacacgaggaaggagtgtctacagcttccggtttctttatg
cctcgaaagacatctgatgccctggaggagcttagaagttacagagaaatgaaagacctt
ctaatctcaaagagtggaatgagggtgctcaccaaagaggaggcataa
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