Fragaria vesca (woodland strawberry): 101306778
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Entry
101306778 CDS
T02666
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101306778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101306778
Spliceosome [BR:
fve03041
]
Common components
Common spliceosomal components
SR proteins
101306778
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
101306778
NCBI-ProteinID:
XP_011458728
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All DBs
Position
LG2:complement(18062533..18068893)
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AA seq
309 aa
AA seq
DB search
MSSRASRTLYVGNLPGDIREREVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDARDAED
AIRGRDGYDFDGHRLRVELAHGGRGHSSGGDRHRDSGGGGGGGRGGRGMSRRSDFRVLVS
GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGVVDYTNYEDMKYAIKKLDGSDFRNA
FSRSAVRVREYDAKRDSSMSPGRGRSPSRGRSYSRSRSRSYSRSKSRSKSPKPKSSRRSP
GRSRSRSRSPPRSRSKSRSLSGSRSRSRSPLPSKRISKSPKKDASKSPKKRSGSRSPSRS
RSRSKSLSR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgcgcaagcagaactctctacgtcgggaacctccccggtgacatacgcgag
agagaggtcgaagatttgttctacaagtatggacgcatagctcatatcgacctgaaggtg
ccgccaaggcctcccggctatgcgtttgttgagtttgaagatgctcgtgatgccgaagat
gcaatccgcggccgtgatggctatgattttgatggccatcgcttgagggtcgaacttgca
cacggtgggcgtgggcattcttctggtggagatcggcatagagatagcggtggtggtggt
ggtggtggtcgaggtggacgtggaatgtctaggcgctccgactttcgtgtgttggtcagt
ggactaccttcttcagcttcatggcaagatcttaaggatcacatgcgccgggctggggat
gtctgtttctcccaagttttccgtgatggtagtggcacaacaggagtagtggactacact
aactatgaagacatgaagtatgccataaagaaacttgacggctctgactttaggaatgct
ttttcccggtccgctgttcgggtgagggagtatgacgcgaagcgggattcatctatgagc
cccggtcgtggtcgatctccttcaagaggtagaagctacagtcgcagtcgtagtagaagt
tatagccggagcaaaagcaggagcaagtctcctaaacccaaatcttcacgccgctctcct
ggtagatctcgatcaaggtccaggtctccacctcgttcacgatcaaagtctcgttctctg
tcgggatcacgatcgagaagcagatctccattgccttcgaagcgcataagtaaaagcccg
aagaaagacgctagtaaaagtccgaagaagcgcagtggcagtcgaagtccaagccgtagc
aggagcaggagcaagagtttgtcacggtga
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