| Entry |
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| Name |
(RefSeq) superkiller viralicidic activity 2-like 2
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| KO |
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| Organism |
fve Fragaria vesca (woodland strawberry)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:fve00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101306821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:fve03019]
101306821
03041 Spliceosome [BR:fve03041]
101306821
03009 Ribosome biogenesis [BR:fve03009]
101306821
03016 Transfer RNA biogenesis [BR:fve03016]
101306821
Enzymes [BR:fve01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101306821
Messenger RNA biogenesis [BR:fve03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
101306821
Spliceosome [BR:fve03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101306821
Complex C
U4/U6.U5 tri-SnRNP related factors
101306821
Ribosome biogenesis [BR:fve03009]
Eukaryotic type
Pre-60S particles
Helicases
101306821
Transfer RNA biogenesis [BR:fve03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
101306821
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG5:complement(13474636..13482230)
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| AA seq |
987 aa
MEEESQTLGKRKEPEPSETPNPNEASPPKRQNLTRTCLHEVAVPAGYTPTKDESVHGTLS
NPAFQGPIAKTYKFELDPFQKISVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR
VIYTSPVKALSNQKYREFNQEFEDVGLMTGDVTISPNASCLVMTTEILRGMLYRGSEVLK
EVAWVIFDEIHYMKDRERGVVWEESIIFMPPEVKMVFLSATMSNATEFAEWICNVHKQPC
HVVYTDFRPTPLQHYIFPVGGTGLHLVVDENEQFKEDNFMKLQDSFSKQKVGEGHRSANG
KAGGRIAKGGSAGPGGSDIFKIVKMIMEKKFQPVIIFSFSRRECEHHAMDMSKLDFNSQE
EKDVVEQVFRNAILCLNEEDRELPAVELILPLLLRGIAVHHSGLLPVIKELVELLFQEGL
VKALFATETFAMGINMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDEQGIC
IIMIDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLLSRAEGQFTAEHVIKNSFHQFQ
HEKALPDIGKKVSQLEQEAEMLDSSGEAEVAEYDKIKLDIAQLEKKMMSEIMRPERVLIF
LLTGRLVKIREGGTDWGWGVVVNVVKKPSSGASSRGGGYIVDTLLHCSPGSSENSSQPKP
CPPRPGEKGEMHVVPVQLPLISTLSKLRINVPSDLRPLEARQNILLAVQELGTRFPQGLP
KLNPVKDMGIQDPEIVELVNQIEALEERLYAHPLHKSQDVHQIKCFQRKAEVNHEIQQLK
SKMRESQLQKFRDELKNRSRVLKKLGHINAEGVVQLKGRAACLIDTGDELLVTELMFNGT
FNDLDHHQIAALASCFIPGDRSNEQIQLRSELARPLQQLQESARRIAEIQNECKLETDVD
EYVESTVRPFLMDVIYCWSKGASFAEVIQMTEIFEGSIIRSARRLDEFLNQLRTAANAVG
EVDLEKKFEAASESLRRGIMFANSLYL |
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| NT seq |
2964 nt +upstreamnt +downstreamnt
atggaagaagaatctcaaacccttggaaaacgaaaagagccggagccttcagaaacccca
aaccctaacgaagcttctcctccgaagcgacaaaacctcaccagaacatgtctccacgag
gtcgccgtccccgccggctacactccgacgaaagacgagtcggtccacggtaccctctcg
aaccccgcattccaaggccccatagccaagacctacaagttcgagctcgatccgtttcag
aagatctccgtggcgtgcttggagcgcaacgagtcggttctcgtctcggcgcacacgtcg
gccgggaagactgcggttgcggagtacgcgattgcgatggcgtttcgagacaagcagagg
gtgatatacacgtctccggtgaaggctttgagtaatcagaagtatagggagtttaatcag
gagttcgaggatgttggattgatgactggggatgtgacgatttcgccgaatgcgagttgt
ttggttatgactactgagattctgaggggaatgctttacaggggatcagaggttttgaag
gaagttgcgtgggtgattttcgatgagatacattatatgaaggatagggagagaggggtg
gtttgggaggagagtattatattcatgccgccggaggttaagatggtgtttctctcggct
acaatgtcgaatgccactgagtttgcggagtggatttgtaatgtgcataagcagccttgt
cacgtggtgtacacggattttaggccgactccgctgcagcattatattttccccgtgggt
gggactgggttgcatcttgtggtggacgagaatgagcagttcaaggaggacaattttatg
aagctgcaggatagtttctcgaagcagaaagtgggggaaggtcacaggagtgcgaatggc
aaggccggtgggagaattgcaaaaggtgggagtgctgggccgggcggttctgacattttc
aaaattgtgaagatgattatggaaaagaaatttcagcccgttataattttcagcttcagt
agaagagaatgtgaacatcatgcaatggatatgtctaagcttgacttcaactcccaagag
gaaaaagatgttgttgaacaggtttttcgcaatgcaatactctgcttaaatgaggaagac
agagagttgcctgctgttgagttaatcttgccactccttctgcgaggcattgctgtgcat
cattctggccttcttcctgttatcaaggaattggtagaactcctttttcaggaaggcctt
gtaaaggccctctttgctactgagacatttgcaatgggtataaacatgccagcaaaaact
gttgttttcacagctgtcaaaaagtgggatggtgatagtcatcgatatattgggtctggg
gagtatatccaaatgagcggtagggccgggcgtcgtggcaaagatgagcaaggtatttgt
atcataatgattgatgagcagatggaaatgaacacacttaaggacatggtgttgggtaaa
ccagctcctttggttagtactttcagactcagctactattcaattttgaatttgctgagc
cgtgcggaaggccaattcacagctgaacatgtgataaagaattcctttcaccaatttcag
catgaaaaggctttacctgatatagggaagaaggtttcacagcttgagcaggaagcagaa
atgcttgattcatcaggagaggctgaagttgcagagtatgataagataaaacttgatata
gcccaacttgagaagaaaatgatgtcagagataatgagacctgaaagagttctaatcttt
cttcttactggtcgcttggttaagataagggaaggtggaacagattggggttggggagtt
gtagttaatgttgttaaaaagccttcatcaggagcttcttcacgtggtggtggttatata
gtagatactttgcttcactgttctcctggttcaagtgagaacagttcacagccaaaacca
tgtccccctcgccctggagagaagggtgaaatgcatgtagtccctgttcagttgccgctg
atatctactctaagcaagctgcgaataaatgttccttctgatttgcggccactggaggca
aggcaaaatatacttcttgcagtgcaggaactgggaacacgttttccacaaggccttcca
aagctgaatcctgtaaaggatatgggcattcaagatcctgaaattgttgagctggttaat
caaatagaagcacttgaagagagattatatgcacacccactgcataagtctcaagatgtg
caccagattaaatgtttccaaaggaaagcagaggtgaatcatgaaattcaacaactgaag
tccaaaatgcgtgaatcacagcttcaaaaatttcgtgatgaacttaagaaccgttcaagg
gtcttgaagaagcttggtcatattaatgccgagggtgttgtccagttgaaggggcgggca
gcctgcttgatagacaccggagatgaacttcttgttactgaactgatgtttaatggtaca
ttcaacgatttagatcatcaccaaattgcagctcttgcaagttgctttattccaggagat
agatcaaatgaacagatacaattgaggtcagagcttgcaagacccttacaacaactccaa
gagagtgcaagaagaatagcagagatacaaaatgaatgcaaattagaaacagatgtagac
gagtatgtggaatcaacagtgaggccattcttgatggatgtgatttattgttggtcaaag
ggtgcaagttttgcggaagttatacaaatgacagaaatctttgagggcagtatcatcaga
tctgccagaagacttgatgaatttttgaaccagttgcgaacagctgctaatgctgttgga
gaagttgatttggagaagaaatttgaagcagcaagtgaaagccttcgccgaggtatcatg
tttgcaaattcactttatctgtag |
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