Fragaria vesca (woodland strawberry): 101306826 Help Entry 101306826         CDS       T02666                                  Name (RefSeq) ATP-dependent RNA helicase DHX36   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism fve  Fragaria vesca (woodland strawberry) Pathway fve03018   RNA degradation Brite KEGG Orthology (KO) [BR:fve00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     101306826  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fve03019]     101306826    03012 Translation factors [BR:fve03012]     101306826 Enzymes [BR:fve01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      101306826 Messenger RNA biogenesis [BR:fve03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      101306826 Translation factors [BR:fve03012]  Eukaryotic type   Initiation factors    Initiation associated factors     101306826 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  OB_NTP_bind HA2_C DEAD HA2_N dsrm AAA_22 nSTAND3 AAA_19 ATPase T2SSE PhoH AAA_23 AAA_16 ABC_tran Myosin_head Motif Other DBs NCBI-GeneID:  101306826 NCBI-ProteinID:  XP_011465768 LinkDB All DBs Position LG5:17467299..17482179 Genome browser AA seq 1032 aa AA seqDB search MHYSRAAVSLLLKSVASSSNHSSCFRSHHLTLCLSNRRYTAEQFSDDEYECDFESQKASS SVANIDEWKWKLSLLLRSDKDQEIVSRDKRDRRDYEQISNLAKRMGLHSEIYGKVVVASK VPLPNYRPDLDDKRPQREVVIPLGLQRRVEGLLQEHLDCLLLSSWKVPANLGDSEYLDQV DKENADSYLDGSVMEKVLQRRSLWMRNLQRAWQESPEGKKMLEFRKSLPSFKENQRLLQA IAQNQVVVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMSVAERVSAE RGESLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLSGITHVFVDEIHERGMN EDFLLIVLKDLLPRRRDIRLILMSATLNAELFSKFFGGAPTIHIPGFTYPVRAHFLEDVL EMTGYKLTFFNQIDDYGQDKLWKMQKQLAPRKRKNQITALVEDALSKSSFENYSSRARDS LSCWTADCIGFNLIEAVLCHICRKERPGAVLVFMTGWDDISCLKDQLKAHPLLGDPNRVL LITCHGSMATSEQVSSLFQYLPLHQHELMKLWDIIVSMCSRLSTCSHMKKVKVQNAIDFL KLIGALDENENLTNLGKYLSMLPVDPKLGKMLIMGAVFHCFDPVLTIVSGLSVRDPFLLP QDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHS LRKQFSYILRDAGLVDADASINNKLSHNQSLVRAIICSGLFPGIASVVHRETSLSFKTMD DGQVLLYANSVNARYQTIPYPWLVFGEKIKVNTVFIRDSTGVSDSILILFGGALTHGIQA GHLKMLDGYIDFFMDPSLMDCYLKIKEELNELIQKKLQDPSLDIHKEGKYLILAVQELVS GDQSEGRFVFGRENRKPRESGDNSRFTRDGTNPKSLLQTLLMRAGHSAPKYKTKHLKTNE FRALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDDSRDEDDNSPPDVTNNMLKL LGKRRRSKRHSG NT seq 3099 nt NT seq  +upstreamnt  +downstreamnt atgcattattcgagagcggcggtgtctctgcttctcaaatcagtagcctcctcctccaac cattcttcttgttttcgttctcaccacctcaccctctgtctctctaaccgccgctacact gcggagcagttctccgacgacgagtatgagtgcgatttcgaaagccaaaaggcttcatct tcagtggccaacattgacgagtggaaatggaaactgagcctgctgctgcgtagtgacaag gaccaagaaattgtttcaagagataaaagagataggagagactatgagcagatatctaac ctcgccaaaaggatgggacttcacagtgaaatatatggcaaagtggtggtggccagcaag gttcctcttccaaactaccgccccgatttggatgataagcgcccacaaagagaggtggtt attcctcttggcttgcaaaggagggtagagggtctactgcaagaacaccttgattgtctc ctgctgagttcctggaaggtaccagccaatttaggtgacagtgagtaccttgatcaggtt gataaggagaatgcggattcttatcttgatggttctgtaatggagaaggtacttcagcgt aggagtttgtggatgcgtaatttgcaaagagcttggcaggaatcacctgaaggaaaaaag atgctagaattcaggaaatcactaccatcgttcaaggagaatcagaggttgctgcaagca attgcacaaaatcaggttgtagtgatatctggggagactggatgtggtaagaccactcag cttcctcaatatatactagagtcagagatagaatctggccgtggagcattctgtaacatt atctgtacacaacctcgaagaatatctgccatgtctgttgctgaaagagtgtctgcagag aggggagagtctcttggtgaaacagtgggttataaagttcgattagagggaatgaaagga aaaaatacccatcttcttttctgtaccagtggcattttacttcgccgtctgttgagtgat cggaacttgagtggtatcacacatgtttttgttgatgaaattcatgaacgaggcatgaat gaagacttcttgttgattgtattgaaagatctgcttccacgccgtcgcgatataagatta attttgatgagtgccactctgaatgcggagctattttcaaaattctttggaggagcgcca acaattcacattccgggtttcacatatccagtgagagcacactttttggaagatgtactg gaaatgactgggtataagctgacttttttcaatcaaattgatgactatggccaagacaaa ctgtggaaaatgcagaagcagttagcgcctcggaaaaggaaaaaccagatcactgctcta gttgaggatgctcttagtaaatcaagctttgagaattatagctccagagcacgtgattca ttatcatgttggacagctgattgcataggatttaatctgattgaagcagttttatgtcat atatgtcggaaggagcggccaggtgctgtcttagtattcatgactgggtgggatgatatc agctgtttgaaggatcaacttaaagcgcatcctcttttaggtgatccgaacagggttttg cttataacctgccatgggtcaatggccacgtctgaacaggttagtagtttatttcaatat ctgcctttacatcagcatgaactcatgaagctttgggatatcatagtatcaatgtgttca aggctatcaacatgctcgcatatgaaaaaagtaaaagttcaaaatgctattgactttctt aagttgattggggcattggatgagaatgaaaatttgacaaatctcggaaaatatttgtca atgcttccagtagatcccaaactagggaaaatgctgattatgggtgccgtatttcattgc tttgatcctgttcttacaatagtgtctgggctaagtgttcgggatccattccttttgcct caagacaaaaaagatttagcaggtacagcaaaatctagattctctgcaaaagattacagt gatcatatggctcttgttcgtgcatatgaaggatggaaagatgcagaaagagaaggatca gcgtatgaatactgctggagaaattttctctctgcccaaacacttcaagctattcattct ctccggaagcagtttagctacatcttaagagacgctggcttggtggatgcggatgcaagc attaacaacaagctaagtcacaatcagtcattggtccgtgcaatcatatgttctggactc ttccctggcatagcatctgtagtgcaccgagagacatccctgtctttcaaaactatggat gatggccaggttttactatatgctaattctgtaaatgcacgttaccaaacgattccctac ccttggctggtctttggtgaaaaaataaaagtcaacactgttttcatacgcgattctact ggtgtttctgattccattttgatcctttttggtggtgccctaacccatgggatccaggct gggcatctgaaaatgttggatggttatattgacttcttcatggatcctagtttgatggac tgctatttgaagattaaagaagagcttaatgagcttattcaaaagaagcttcaagatcca agcctggatatccacaaggaaggaaagtatctcatacttgctgttcaagagctggtatct ggagatcaaagtgaaggaagatttgtgtttggccgtgaaaacaggaagccaagggagtct ggtgataacagcagattcacaagagacggaaccaaccctaagagtttgctgcaaacttta ttgatgagagcgggacattcagctccaaaatataaaacaaagcacctcaagacaaatgag ttcagagcccttgtggaattcaagggcatgcagtttgttggaaagcccaagaaaaataag cagctcgcggaaagggatgctgccgtagaagcactggcctggttgactcacacctcagac gacagtcgtgatgaagatgacaactccccacctgatgtcactaataacatgctgaaactt ctggggaaacgtagaagatcaaagcgccactctggttaa

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