Fragaria vesca (woodland strawberry): 101307200
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Entry
101307200 CDS
T02666
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
fve
Fragaria vesca (woodland strawberry)
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
101307200
NCBI-ProteinID:
XP_004298168
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Position
LG4:12539768..12542398
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AA seq
876 aa
AA seq
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MASQSWYRGRVKAVPSGDCLVIQALRPNNTGIPSERVITLSSVRAPKLAGKDRSADEPFA
WDSREYLRKLCLGKEVVYCIDSVEEPLGLVGTVFLGNDNVAALVVQKGWASVTLPSTTPY
YVELQFHMDQAFNKGLGLWSKAPGAAEASIRTLPPQLNLETTKTLLAANKGKRVEAIVEH
VCDGSTVLAHLLPEFQFVLVIVSGTQAPYVGRNAYPFASEAKLFTESRVLNRDVHIVLEG
VDKFSRLIGSVYYGDSERDLGLELVENGYAKFVQWSAKVMDEDAKQQLKTAELEAKKSKR
RIWTNFVPPATNSKPIHDQNFTGTVVEVVSGECVIVADDSRERRVSLSSIQCPKMGRRGD
EPAAYAREAKEMLRTRLIGRQVNVQMEYSRKFGQADLESSRVIDFGSVFVKADGEDERNQ
AEVNVAELLVECGFGTVIKHKEYDERSRYYDALLAAETCAIAEKKGLHSSKKAPVVHMTD
LTMATAYEAGDVLPSLQRTRRVSAVVEYVFSGHRFKLYIPKETCIIFFSLSGVRCPSRGE
PYSDEAIAVMRRRLMQRDVEIEVETIDRNGTFVGSIWESGTNVSVALVEAGLAKYIPFGG
SDKIQDGHLLERAMKDAKTKKLKIWENFDEQKELKVVVTEVLDSGKFYVRTVGDEKSASI
QQQLASLNLEEAPSVSDAFNPKQGDIVLAQYSADNSWNRARIVNMRRGNFKVFYIDYGNQ
EVVPYSQLRPLIPSAAAVPGLAQLCSLAHVIVPSLEEEFGQEAGEYLSECILDKEFTAVI
EGRDISEGKFAKGQGTGPALMVTLVTSDDVDSINATMIRNGLASLDNQKKRSWKSRTLRE
FQQDAKTFRRGMWHDYYESDHHEKKAPPARKAAGSQ
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacaatcttggtatagaggcagagtcaaggctgttccttcaggtgattgcctt
gtcatccaggcccttcggccaaacaataccggaatcccatcggaaagagttataactttg
tcatcggttcgtgctcccaaactagccggtaaagatcgcagcgctgacgagccttttgca
tgggacagcagagagtatctgaggaagctctgcctcggaaaggaggtggtttactgcatt
gattccgttgaagaaccgctgggattggtcggtactgtcttccttggtaacgataatgtt
gcagcccttgttgttcaaaaagggtgggcatctgtaacgttgccgagcacaactccttac
tatgttgagctgcagtttcacatggaccaagcctttaataaaggtctcggtctctggagc
aaggctcctggtgcggcggaggcatccattagaactctacctccccaactcaacttagag
accaccaagactcttttggctgcaaacaagggcaagcgtgtagaagctatcgtcgagcat
gtttgtgatggcagtacagttctggctcatttgcttccggagtttcagtttgtcctagta
attgtttcaggaactcaggcgccctacgttggacgtaatgcttatccttttgcatcagaa
gcgaagcttttcacagagtctcgtgtgttgaatagagatgtgcatattgtcttggagggt
gtcgacaaattcagccgtctgattggttctgtgtattacggagactctgagagggacttg
gggctggagcttgtggagaatggttatgctaaatttgtacaatggagcgcaaaagttatg
gatgaagatgcaaagcagcagctcaagactgcagagcttgaagctaagaagagcaagcgg
aggatttggacaaactttgtacccccagctacaaattccaagccaattcatgaccagaat
ttcactggaacagttgtggaggttgtaagtggggaatgtgtcattgtggcggatgattct
agagagcggagagttagcctttcgagtattcagtgtccgaagatgggacggagaggtgat
gagccggcggcctatgcacgtgaagccaaggagatgctgaggacacgccttattggacgc
caagtgaatgttcaaatggagtattccaggaagttcggccaagcagatttggagtcttct
agagtaatagatttcggatcagtctttgttaaggctgacggagaagatgaaagaaaccag
gctgaggtaaacgttgctgagcttctggttgaatgtggtttcggtaccgttatcaaacat
aaagagtatgatgagagatcaagatactatgatgccctacttgctgccgaaacatgtgct
attgctgaaaagaaaggactccattcttcaaagaaggcccccgttgtgcacatgacagac
ttgacaatggcaacggcctacgaagcaggagacgtcttgccgtccttgcagcgaactagg
agagtgtctgcagttgtggaatatgtcttcagcggtcatcgttttaaactctacattccc
aaggagacgtgcatcatcttcttttctctctccggtgtgagatgtcctagtcgtggtgag
ccctattcggacgaagcaattgccgtcatgaggcgaagattaatgcagagagatgttgag
attgaagtggagactattgatagaaacggaactttcgtgggaagtatatgggaatctggg
accaatgtgtcagttgccctcgttgaagctggccttgcaaagtatattccatttggtggt
agcgataagatccaagatggccatctcctagaacgagctatgaaagatgcaaaaacgaag
aagctgaaaatttgggagaattttgacgaacagaaagaactaaaggtagtggtcacagaa
gttctggacagcggtaaattttatgtgaggacagttggggacgagaagagtgcctctatt
cagcaacagcttgcttcgttgaaccttgaagaagctccttctgtaagtgatgcttttaat
cctaagcagggtgacattgtccttgctcaatatagtgcagataattcttggaacagagct
aggattgtcaatatgcgaaggggcaattttaaagtgttctacattgactatggtaatcaa
gaggttgtcccttacagtcagttacggcctcttattccttctgctgccgctgtacctggt
ctcgctcagctatgcagcctggcacatgttattgtcccgagcttggaggaggagtttggt
caagaagcaggtgagtatttgagcgagtgcatattggacaaagagttcaccgccgtgatt
gagggaagagatatttctgaaggaaaatttgccaaaggccaaggaaccggaccagctctt
atggtaactcttgtcacatcagatgatgttgacagtataaatgctaccatgattcgtaat
ggacttgcttctctagataaccagaagaagaggtcatggaagtctcgtaccttgagagag
ttccagcaagacgcaaaaaccttccgccgagggatgtggcatgattattacgagtctgat
catcatgagaaaaaagctcctcctgcaagaaaggctgctggcagtcagtga
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