Fragaria vesca (woodland strawberry): 101307274
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Entry
101307274 CDS
T02666
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101307274
Membrane trafficking [BR:
fve04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
101307274
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_2
TPR_12
TPR_1
bL31_N
Motif
Other DBs
NCBI-GeneID:
101307274
NCBI-ProteinID:
XP_004291670
LinkDB
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Position
LG2:28780588..28794522
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AA seq
1239 aa
AA seq
DB search
MANYLAQFQTIKNSLDHLVIAVEDVSDLWPTVKKGFEEHLPFKRACLNNKTRNPVFVENF
RAEFILTTDARLRSRFPQEQSLFWFREPYATAVLVTCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAHPNNDQATKMASKVYAKLEVDFSSKKRERCCKFDLYSAEESFWEDLEAKI
MECIRNTLDRRAQFYEDEIRKLSEQRFMPVWNFCNFFILKESLAFMFEMAHLYEDSLREY
DELEICYLETVQTMGRRRDFGGVDHGDDQASLLNSGNKPLTQIVQDDSFREFEFRQYLFA
CQSKLLFKLNRPFEVASRGYSFIISFSKALAFHENILPFCMREVWVITACMSLVHATASH
YKEGLAAADIEKEFYRLQGDLYSLCRVKFMRLAYLIGYGTNMERSPGNSASLSMLPWPKP
ATWPSVPPDASSEVLAKEKIILQATPATKHFGIQRKPLPLEPSLLLREANRRRASLSAGN
MFEMLDGRQNFTDGSGSDASIKMPSLQKVQASAMSRTNSSPGMFESSIDRPMRLAEIYVA
AERALQATVSNTDLWKSLSSMEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVLF
KNGNYDLAAKSYEKVCALYAGEGWQDLLAEVLPNLAECHKILNDQAGYLSSCVRLLSLDK
GLFLMKERQAFQSEVDHLAHAEMKQPVPLDVSSLITFSGNPGPPLELCDGDSGTLSVTFW
SGFPVDITLDSLNLTLNAIFNTDEVAKALWSSTAIVLKPGRNTVTLDLPPQKPGSYVLGV
LTGQIGQLRFRSHSFSKGGPEDSEDFMSYEKPPRPVLKVFKARPLVDLAAAISSALLINE
TQWVGIIVRPINYSLKGAVLYVDTGPGLKIEESHFIEMESYIAESNNSVEQLALSGDRVE
FPDWASNLPSVVWIPVHAISETLARGSSSVAPQRQINLDGMRTIALKLEFGASHNQIFER
TLAVHFTDPFHVSTQVADKCNDGTLLLQVILHSEVKATLTIFDAWLDLQDGFVNTGQSDG
RPTSAYFPLVVSPNSRAGILFSILLGKTNAEDEAKAVQSDSILNIRYGISGDRTTGAHPP
VASQSSVPEGGGQGLIFRSALVLQRPVLDPVLAVGFLPLPSSGLRVGQLVTMKWRIERLK
DFEENERSHNNDEVLYEVNANTESWMVAGRKRGHITLSANEGSRIEISILCVPLVAGYVR
PPHLGLPDVDESNISCNPAGPHLVCVLPPTLSSSFCIPA
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggccaactacctcgctcagttccagaccataaagaattcactcgatcatctcgtcatc
gctgttgaagatgttagtgatttgtggcctactgtgaagaagggatttgaggagcatttg
cctttcaaaagagcttgtttaaacaacaagacacgtaatcccgtgtttgtagagaatttc
cgggctgaattcatattaacaacagatgcgagactccgcagccgattcccacaggagcag
tcattgttttggtttcgggagccatatgcaactgcggttctcgtcacctgtgaggatctt
gatgagttcaagaccatcctcaaaccacggctaaagctaattgtccaaaatgatgaacgg
gaatggtttattgtttttgtatccaaggcgcatccaaacaatgatcaagccaccaaaatg
gcaagtaaagtatatgccaaacttgaagttgattttagctcgaagaagagagaaaggtgt
tgcaaatttgatctatatagtgctgaagaaagcttttgggaagacttggaagccaagata
atggagtgcatcagaaatacattggatagacgtgcacagttttatgaggatgagatacgc
aagctcagtgaacaacgcttcatgccagtttggaacttctgcaatttctttattttaaag
gaaagcttggcttttatgtttgagatggcccatctttatgaagattcattacgtgaatat
gatgagctagaaatttgttatttggaaacagtccaaacgatgggaaggagaagggacttt
gggggagttgaccatggtgatgatcaagcatcattgcttaattctggaaacaaacctttg
acacaaattgttcaagacgactcgtttagggaatttgaatttagacagtatctgtttgcc
tgtcaatcaaagcttctattcaagctgaatcgcccctttgaggttgcgtccaggggatac
tcattcattataagcttttcaaaggctctggcttttcatgagaatattctacctttttgt
atgcgtgaagtttgggttataacagcttgcatgtccttagtccatgcaactgcttcacat
tataaggaaggacttgcagcagctgatatagaaaaggagttctaccgccttcaaggtgat
ctttactcactgtgcagggtgaagttcatgaggcttgcttatttaatcggatatggcaca
aatatggaaagaagtcctggcaacagtgcttcactcagcatgctaccttggcccaagcca
gcgacttggccttctgttccacctgatgcttcgtctgaggttctagcaaaagaaaagata
attctacaggcaactccagcaaccaagcactttggtattcagagaaaaccattgcctctt
gaaccttctctactactgcgtgaggcgaatcgcaggagagcttctctctctgctggaaat
atgtttgaaatgcttgatggtcgccaaaattttactgatggttcaggttcagatgcatca
attaagatgccctcgttacaaaaagtccaagcaagtgctatgtcgcgtacaaactcttca
ccaggaatgtttgagagctcaattgataggcccatgagacttgcagagatttatgttgca
gctgaacgtgctctgcaggctacagtttcgaatactgatctgtggaagtctttgtcatct
atggaggagtttgagcaaaaatatttggagctgactaagggtgctgcggacaattaccat
agatcctggtggaaaaggcatggagttgtccttgatggtgaaatagcagcagtcttgttt
aagaatggaaactatgatctagctgcaaagtcatatgagaaggtttgtgctctttatgcg
ggtgaagggtggcaagatttattggcagaagtcctgcccaacttagcagagtgtcataag
atactcaatgaccaagctggctatctatcttcttgcgtgaggcttctttcattggataaa
ggcttgtttttaatgaaggaacgtcaggcttttcagtctgaggttgatcatcttgcacat
gctgaaatgaagcaacctgtgccactggatgtctcatcactaattacattctccggtaat
cctgggcctccattagaattatgtgatggggattctggtactctatctgtgacattttgg
agtggctttcctgttgacataacgcttgattcgctaaatctcacattgaatgcaattttc
aatactgatgaggttgctaaggcattatggagctctactgcgattgtattgaagcctggt
cggaatactgttaccctagatttaccaccccaaaaaccaggttcatatgttttgggggtt
cttactgggcagattgggcagttacgattcaggtctcatagcttttccaaaggcggccct
gaagacagtgaggattttatgagttatgaaaagcctccgaggcctgttttaaaggttttc
aaagcacgacctcttgttgatcttgctgcagctatttcgtcggccctgcttataaatgaa
actcaatgggttggaattatagtaaggcctattaactactccctcaaaggtgctgtcttg
tatgttgatactggtcctggtcttaaaattgaagagtcccatttcattgagatggaaagc
tacattgctgaatcaaataattcagttgagcaattggctctttctggtgatagagtagag
tttccagattgggcaagtaatttgccttctgttgtatggattccagttcatgctatcagc
gaaacacttgcaagaggatcatcttcagtggctccccaaagacagatcaatttggatgga
atgaggacaatagcactgaaacttgaatttggagcttctcacaatcagatttttgagagg
accctagctgtgcattttacggatcctttccatgtgagtacacaagttgcagataaatgc
aatgatggaactttgcttctgcaggtgattttacactctgaagtgaaagccacattaacg
atctttgatgcttggcttgatcttcaagatggatttgttaataccggacaaagtgatggg
cgaccaacctctgcctactttccacttgttgtttcaccaaattctagagccggaatatta
ttcagtatacttttagggaagacaaacgctgaagatgaagctaaggctgttcaatcagat
agtatactaaatattagatatggaatttctggtgatagaacaactggagcgcatccacct
gtggcatctcaatcttctgtgcctgagggtggcggacagggtctgattttcaggagtgct
cttgttttgcaaaggcctgtgcttgatccagtcctggccgttggttttcttcctctccct
tctagtggccttagggttggccagctggttaccatgaaatggaggattgaaagattaaag
gattttgaggagaatgaacgttcccataacaatgatgaggtgttgtatgaagtcaatgca
aatactgaaagttggatggtagctgggaggaaaagagggcacatcactctctctgcaaat
gaaggttcaaggatagagatttcaatactatgtgtgcctctggtggcgggatatgttcgt
ccccctcatcttggtctgccagatgttgatgaatcaaatataagttgcaatccagcaggg
cctcatttggtttgtgtcttgcctccaactttgagttcttctttctgcattcctgcatga
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