Fragaria vesca (woodland strawberry): 101307376
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Entry
101307376 CDS
T02666
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
101307376
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101307376
Enzymes [BR:
fve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
101307376
Protein phosphatases and associated proteins [BR:
fve01009
]
HAD phosphatases
Fcp/Scp phosphatases
101307376
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
101307376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
101307376
NCBI-ProteinID:
XP_004293503
LinkDB
All DBs
Position
LG3:complement(2933434..2942138)
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AA seq
955 aa
AA seq
DB search
MLKLVYKGEELLGEVEVYPEELNNKKIWDELKEIRISHFSQSSERCPPVAVLHTISSNGV
CFKMESKSSSSSSQDTSRLFLLHSSCIMENKTAVMNLGVEELHLVAMYSRNNQKQHPCFW
GFSVSSGLYSSCLGMLNLRCLGIVFDLDETLIVANTMRSFEDRIEGLQRKIQCEVDAQRI
SGMQAEIKRYQDDKFILKQYAENDQVVENGRVIKTQSEVVPALSDSHQPIIRPLIRLQEK
NIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD
PESNLINANKLLDRIVCVKSGLKKSLFNVFQESLCHPKMALVIDDRLKVWDDRDQPRVHV
VPAFAPYYAPQAEANNAVPVLCVARNVACSVRGGFFREFDDSLLQKIPEIFYEDNIKDFS
SPDVSNFLVSEDDASASNGNRDQLPFDGMADAEVERRLKEATSAAPTVSSAVSNNDPRLA
SLQYTVPLSSTVSLPTNQPSMMPFHNVQFPQSASLVKPLGHVGPADLGLHSSPAREEGEV
PESELDPDTRRRLLILQHGQDTRESVPSEPSFPVRPQVQVSVPRVQSRGGWFPVEEEMSP
RKLSRMVPKEPPLNSEPMQIEKHRSHHSAFFPKVENSMPSDRILQENQRLPKEAFHRDNR
LRFNQAMSGYHSFSGEEPPLNRSSSSNRDFDYESGRAISNAETPAGVLQEIAMKCGTKVE
FRPALVPSTELQFYVEAWFAGEKIGEGTGRTRREAHFQAAEGSLKNLANIYISRGKPDAL
PIHGDASKFSNVTNNGFMGNMNSFGTQPLPKEDSLSSSTSSEPSRPLDPRLDNSRKSVSS
VSALKELCTMEGLSVLYQPRPPPPNSTEKDEVHVQAEIDGEVLGKGIGLTWDEAKMQAAE
KALGNLRSTLYGQKRQGSPRPLQGMPSKRLKQEFPQVLQRMPSSTRYSKNAPPVP
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagctggtttataaaggagaagagttacttggggaggtagaggtatacccagaa
gagttgaacaacaagaaaatctgggatgagttgaaggaaatcagaataagccatttttct
caatccagtgagagatgtccacctgtggctgtgcttcacaccattagctctaatggggtt
tgcttcaaaatggagtccaagtcttcttcttcttcttctcaggacacatcgcggctcttt
cttttgcactcctcatgtatcatggagaacaagactgcagttatgaacctaggggtggag
gagctgcatttggttgccatgtattcgagaaataatcaaaaacagcatccatgtttttgg
ggattcagtgtatcctccggattatacagttcttgccttggcatgctgaacctaagatgt
cttggcattgtatttgatcttgatgaaacacttattgttgcaaatacaatgcgatcattc
gaggatcgaattgagggcctacagaggaaaatacaatgcgaggtggacgcacaaaggatt
tctggtatgcaggcagagatcaagcgataccaagatgacaagtttatactgaagcaatat
gctgaaaatgatcaagttgttgaaaatgggagggtgatcaaaactcagtctgaggttgtt
ccagccttgtctgacagccatcaacctatcatccggccacttatacgtttacaggagaaa
aatattatcttgactcgcattaatccacagattcgcgatacaagcgttcttgtgaggttg
agacctgcatgggaggatctcaggagctacttgactgcaagagggcgcaagcgttttgaa
gtttatgtttgcacaatggctgaaagggattatgctttagaaatgtggaggcttcttgat
ccagaatcaaatttgataaacgcaaataaattactggaccgcatcgtatgtgtcaagtct
ggtttaaagaagtcgttgttcaatgtcttccaagaaagcttgtgccatcctaagatggca
ttggtgattgatgatcgcttgaaggtgtgggatgacagagatcaacctcgagtgcatgtt
gttcctgcatttgcgccttattacgctcctcaagctgaagcaaataatgctgtccctgtc
ttgtgtgttgcaagaaatgttgcctgcagcgtcagaggtggcttttttagagaatttgac
gacagtctactgcaaaagattcctgaaattttttacgaagataatattaaagatttctct
tctcctgatgtgagcaattttctagtttcagaggatgatgcttctgcttcaaatggaaat
agagatcagcttccttttgatggcatggcagatgctgaagttgagagacggctaaaggaa
gcaacctcagctgctccaacagtctcatcagcagtcagtaacaacgaccctaggcttgct
tctcttcagtacacagtgcctctttccagcacagtttcactaccaacaaatcaaccgtca
atgatgccttttcataatgtgcagttccctcagtcagcttctctagttaaacctttgggt
catgttggacctgcagatttaggcttgcatagttctcctgctagagaggaaggggaggtg
cctgaatctgaattagatcctgatacaaggcggaggctactgattttgcagcatggccag
gatacaagagagtctgtacctagcgaaccttcatttcctgtaagaccccaagtacaagtc
tctgttccacgggtgcaatcacgtggaggctggtttccagtggaagaagagatgagccca
cgaaaactaagccggatggtacccaaagaacctcctttaaattcagaacccatgcagatc
gagaagcatcgatctcatcattcagcttttttcccaaaagttgagaattctatgccatct
gatagaattcttcaagaaaatcagagattgccgaaagaggcatttcatagagataatcgg
ttgagattcaaccaagcaatgtctggttaccattcattctcaggtgaggaacctccctta
aatcgatcatcttccagcaacagagattttgactatgaatctggacgagctatatcaaat
gcggaaactcctgctggtgttttacaggaaattgcaatgaagtgtggaacaaaggtggag
ttcagaccagctttggttcccagcacggaactgcagttttatgttgaggcatggttcgca
ggagaaaaaattggtgaaggaactggtagaacaagaagggaagctcatttccaggctgcg
gagggttctctaaagaatttagctaatatatacatttcccgtggcaagcctgatgctctg
cccattcatggggatgcgagcaagttttctaatgttacgaacaatggttttatgggtaat
atgaattcttttgggactcagccattgccgaaagaggactctctctcgtcttcaacttca
tcagagccatctaggcctctagaccctaggctggataactctagaaagtccgtgagttca
gtgtctgcactcaaggaactgtgtacaatggagggtcttagtgtactttatcaaccacgg
cccccaccacctaattcaacggagaaagatgaagtgcatgtacaggctgaaattgatgga
gaggtcttggggaaggggattggcttaacttgggatgaggctaagatgcaggctgctgag
aaggctctcggaaatctaagatcaacactatatggtcagaaacgtcaaggttctccaagg
cctttgcaagggatgccaagtaaacgcctgaagcaggaatttccacaagttctgcagcga
atgccctcttctactagatattcaaaaaatgctcctcctgttccttga
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