Fragaria vesca (woodland strawberry): 101307796
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Entry
101307796 CDS
T02666
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101307796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101307796
Spliceosome [BR:
fve03041
]
Common components
Common spliceosomal components
SR proteins
101307796
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
101307796
NCBI-ProteinID:
XP_004300636
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All DBs
Position
LG5:complement(27309050..27311666)
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AA seq
253 aa
AA seq
DB search
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAAKAVDKLDGRVVDGREIMVQFAKYGPNAERISSHKGKISESSSKLKSRSR
SRSPRPRYRDEYKDRDYRRRSRSRSRDRYDRDRHHRSEREHRYRSRSRSASPDNRRRSKY
DDERRSRSRSYGSVSPARPSSKSRRSPSPRRTPPRSESPDARNRNERSPSPRDVSPQPRR
EDSPSPRKSDVDE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggacgatccggaccgccggacatcagagacacctactccctcctcgtc
ctcaacatcactttccgtaccaccgccgacgacctcttcccgctgtttgacaagtacggc
aaggtcgtcgacgtgtttatcccccgcgaccggaggaccggcgactcgcgcggcttcgct
tttgtgcggtacaagtatcaggatgaggcggctaaggccgtggataagctcgacgggaga
gttgtggatggaagagagattatggttcagtttgctaagtatggtccaaatgctgagagg
atctccagtcacaaggggaaaattagtgaatcttcctccaagttgaagagcaggtccaga
agccggagccctcgtccaaggtatcgagatgaatacaaagatagggattacaggagaaga
agtcgcagtcgtagtagggacagatacgaccgtgacaggcaccataggagtgaaagagag
catcgctacagaagcaggagccgcagtgcaagtcctgataatcgtagaaggagcaaatat
gatgacgagcggcgtagtcgaagccggtcctatggaagtgtctcacctgctcggcctagc
tctaaatctcgaaggagcccctctcctcgtaggacacctccaaggagtgagagtccggat
gcacgcaaccgcaacgaacgctctcctagccccagagatgtttcaccacagcctcggcgt
gaagattctccaagtcctcgtaaatctgatgtcgatgaatga
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