Fragaria vesca (woodland strawberry): 101307821
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Entry
101307821 CDS
T02666
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101307821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101307821
Membrane trafficking [BR:
fve04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
101307821
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
EzrA
AcrIIA4
Peptidase_M61
Motif
Other DBs
NCBI-GeneID:
101307821
NCBI-ProteinID:
XP_004287113
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Position
LG1:complement(710468..712995)
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AA seq
199 aa
AA seq
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MKVTALLVLKCSPEGSDPVILANASDTSHFGFFQRSSVKEFIVFVGRTVAKRTPQGQRQS
VKHEEYKVHAYNSNGLCALGFMDDHYPVRSAFSLLNQVLDEYQKKFGESWRTAQEDSTES
WPYLNEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLST
ASQMFYKQAKKTNSCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcacggcgctgctggtcctcaagtgcagcccggaaggatccgacccggtcata
ctggccaacgcctccgacaccagccatttcggcttcttccagaggtccagcgtcaaggag
ttcatcgtcttcgtcggccgcaccgtcgccaaacgcacccctcaaggtcaacgccagtct
gtcaaacacgaagagtataaagtgcatgcttacaacagcaatggtctctgtgcattggga
ttcatggatgatcactatccagtaaggagtgcgttttcgctgctcaaccaggtgttagat
gagtaccagaagaaatttggtgaatcttggaggactgcgcaagaggacagcactgaatcc
tggccttacctaaatgaggctctaaccaaattccaggaccctgcagaagctgataagttg
ttgaaaattcagagggaattggatgaaacaaagattattctccataaaactattgatagt
gtacttgcacgaggtgagaaactggacagcttggttgaaaagagttcggatcttagcaca
gcatcacagatgttctacaagcaggcaaagaagaccaattcttgttgtaccatactgtaa
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