Fragaria vesca (woodland strawberry): 101307824
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Entry
101307824 CDS
T02666
Name
(RefSeq) uncharacterized LOC101307824
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101307824
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101307824
Surveillance factors
Other surveillance factors
101307824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
101307824
NCBI-ProteinID:
XP_011468197
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All DBs
Position
LG6:complement(36364232..36371377)
Genome browser
AA seq
1488 aa
AA seq
DB search
MMAHGKVSLPQDLLPSPAIFSSSSAKADEASEGNAGEKALKGSLDESKDHLASESSIPLS
PQWLHAKAVDAKPLTSGTSGEIHAPGSLSHGNSTDSNTRDVWRSDGSRDRKDWRRNAPDL
DVNRRWREEERETGLLGRRDRKKEDRRVGVTSTRDITENRAEDHRAGGPSTRDVTENKIL
SSDRWHESRRDNKWSSRWGPEDKDKDSRIEKTDLEREDAHVDKQSLVSSNRAVPERDGDS
RDKWRPRHRMEVQSGGPAPYRAAPGFGMARGQVEKVGFASGRGRSHTSGSVQIGRPSSIS
TIGSVLDQNQSVLGKAGPFTEKYRYPRGKLLDIYRKQKIESTFDIVPEGMEHVSPITQVG
CIEPLAFVAPDADEEAGMEDIWKGRITSSDDGKGISNASLKKEEDKKISSQSEENALSTG
EVSTICGPQTQTLNEGVEGGHRVPIGTAIADGSNLVAPKNCDHKSATETDGLSNNVDELR
ISGCHDVRDFSLTKHSMSEYYEAATNVTGSQLPDSSSPFHIPSLQQASSSDHFKSNEKAD
LERVVSFEDLSLCYLDPQGNIQGPFLGIDIIQWFDQGFFGTDLLLRLTDAPDGSPFQELG
DMMPNLKTQSGSVSNSNLPTNIESLDGVGSMLEERKTAPHYEESNNLNIQHWTPSGLEPT
SSDDLHSRIRNNNYNFELQYLDNQRFQNYVERDEEIVYPGRPKSSSDFPLRRPSADIHGS
FSNSPSVPSLSDEVSESNLPNCQDDKLHPFGLLMSELRGNSHIRPAQASNVSLGMDDQAQ
FSDTLFEGGISKLNWLNNPNIPMHQVVPDMEHLIELQRQEQQQHRLLELQQQRQLEFQRQ
QQHELEFQQQRQLQQQRQLELQQQRQLELHLQQQHQLELQQQHQLELQLQRQLELQQQRQ
LEQQQQQQYHLELQQQRKLEQQLQRLQQQRQLEFQQQQRHLELQQQQRQLELQPQHQLEQ
HLRHHQNLPQHQQSQAEQLLLEQLLSRQMPGSYGQWKMDATRANLHDQLHPNDLHHVSHS
SRHNPSLEQIIQATVGEGALPVHSDFFDLISQAKLANRNTSELPLRLNEQELQAQQISMA
LREQQMEGERRVGGPWFADEAGPFVRDPAGHHQAHMLGHNSSENYQKQQRFPSNEQELSH
RNWNRASQERPQGGFYEPNPTEFDRFSVPAGSHGMNLDIANICGQDLDVHEQYQLNSSID
ERGSLSSRGQGGSVHLPFNVLPDQSVGMNNSFTEGPHNSNYSILLQDQLGSYGMNEQASN
MARRSDSRAFMDPQFLSGTRDTPHEGNMVEQQNTAIDSEELPSNAHSRHSSLSSAGGCGG
FHSSEMGVDKSLGEDVHDGRLPSTTTKGFDSATSRRRVLSSQDVLSESALSLPVKPRSST
SLRTSEGKPAATPVSESLATSKNHAQFRRTSSYSDAGVSETSFMDVLKKPVIPEADNRGA
MESSDGGGQVGRTGKKKGKKGRQIDPTLLGFKVSSNRIMMGEIHGLDD
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccacggcaaagtcagtctccctcaagatctcctcccctcgccggcgatcttc
tcctcctcctccgccaaagcagatgaagcctcggaaggaaatgctggggagaaggctcta
aaagggtcacttgatgagtcaaaagatcacctagcatctgagagcagcatacctttgtct
cctcaatggctgcatgctaaggcagttgatgctaagccactcacaagtggaacatcaggg
gaaatccatgcaccagggtctttgtctcatggtaactctaccgattccaatacaagagac
gtgtggcgttcagatggttctcgggacagaaaagattggaggaggaatgcacctgattta
gatgttaaccgtcgctggcgtgaggaggagagagaaactggcttacttggtaggagggat
cgcaaaaaagaagatcgccgtgtaggagtcacttcaactagggatattactgagaataga
gcagaggatcaccgagcaggtggcccgtctactagagatgttactgagaataaaattttg
tcttctgaccgctggcatgaatcgcggagagacaataaatggtcatcaaggtggggccct
gaagataaagacaaggattctcgtatagagaaaacagatcttgagagagaagatgctcat
gttgacaagcagtctcttgtcagtagcaatcgtgcggttcctgaacgtgatggtgattct
cgtgataagtggaggccacgtcatcgcatggaggttcaatctggggggccagcgccatac
cgtgccgcaccaggatttgggatggccagaggacaggtggaaaaagtaggatttgcttct
ggacgagggaggtcccatactagtggtagtgtacagattggaagaccttcctctatatct
actattgggtctgttctggatcaaaatcaaagtgtgttgggaaaagctggcccctttact
gagaagtatcgttaccccaggggaaagctcctcgatatttatcgtaagcaaaagatagaa
tcaactttcgatattgtgcctgaagggatggagcatgtctctccaataacccaagtgggc
tgtattgagccattagcttttgtcgcacctgatgcagatgaagaggctggtatggaagat
atttggaagggaagaatcaccagcagtgatgatggtaaaggaattagtaatgcctcttta
aaaaaggaggaagataaaaagatttcatcacagtctgaagaaaatgcgctgtctactgga
gaggtctcaactatttgtggcccgcaaacacaaactttgaatgaaggggttgaaggcggg
cacagagttcctattggcacagcaattgctgatggatcgaatctggtagctccaaagaac
tgtgatcacaaaagtgctacggagactgatggcctcagtaataatgttgatgaactaaga
atttctggatgccatgatgtgagagatttcagcctcacaaagcattctatgtcggaatat
tatgaagcagctactaatgtgactggtagccagcttcctgattcaagttcaccatttcat
attccatctctgcagcaagcctcaagtagtgatcatttcaagagcaatgagaaggcagat
ctggaaagggttgtctcatttgaggatttaagtttatgctatcttgatcctcaaggaaac
atccagggacctttcctggggatcgacataattcaatggtttgatcaaggattttttggg
actgacttactgttgcgcttgactgatgcccctgatggttctccttttcaagaactcggt
gacatgatgccgaatctgaaaactcaatccggatcggtctccaactccaatttgcctacc
aacatagaatcgttggatggtgttggaagcatgttggaagagaggaaaactgctcctcac
tatgaggagtctaacaatctaaatattcaacattggactccatctggacttgaacctacc
tcaagtgatgatttgcactcaagaatacgcaataacaattacaacttcgaactccagtac
cttgataatcaaaggtttcaaaattacgttgaaagagatgaagaaatagtatatcctgga
aggcctaaaagtagcagtgattttcctctgaggagaccttcagctgatattcatggctca
ttttcaaattccccaagtgttccttccctttcagatgaagtttccgaaagcaacctacct
aattgccaggatgataagttacaccctttcggcctgttgatgtctgagctcagaggcaac
tctcatataagacctgctcaagcttccaatgtgtctttaggcatggatgatcaggcacag
tttagtgataccttgtttgagggaggcatatctaaacttaattggttgaataatcctaat
atcccaatgcatcaagtggtgcctgacatggagcatctaatagaactacagcgtcaagaa
cagcagcagcatcgcttattggagcttcagcaacaacggcagctggagtttcaacgtcag
cagcagcacgagttggagtttcaacagcagcgccaactccagcaacagcgccagttggag
ctacagcagcagcgtcagttggaacttcaccttcagcagcagcaccagttggagcttcag
cagcagcaccagttggagcttcagctgcagcgccagttggagctacagcaacagcgccag
ttggagcagcagcagcaacagcaataccatttggagcttcagcagcagcggaagctggag
cagcagctgcagcgtcttcaacaacagaggcagttggagtttcagcaacagcagcgtcac
ttagagcttcagcaacagcagcgtcaattggagcttcagcctcagcaccaattggagcag
caccttcgccatcaccaaaatttgccgcagcaccagcagtcccaagccgaacaattgctc
cttgaacagttattgagtcgacagatgcctggtagttatgggcagtggaagatggatgct
acacgagccaaccttcatgatcagttacacccaaatgatttgcaccatgtatctcattca
tcaaggcacaatccctcgcttgagcagatcatccaagcaactgtgggcgagggtgccctc
ccagtacattctgatttttttgacctcatatctcaggccaagctagcaaataggaacaca
tcagagctgccactccgccttaatgaacaagagttgcaggcacaacaaatatctatggca
ttgagagagcagcagatggaaggggaaaggcgtgttggtgggccttggtttgcagatgaa
gcaggtccttttgtgagggatcctgctgggcatcaccaggctcacatgttgggacataat
tcttcagaaaattaccagaaacagcagaggtttccatccaatgaacaggaactaagccat
cgcaattggaatcgggcctctcaggagagacctcagggaggattctatgaacctaaccct
acggaatttgataggttctcagttcctgcgggttctcatgggatgaacttggatattgca
aacatatgtggacaagatctagatgtgcacgaacaatatcagcttaattcctctattgat
gagcgtggatctctatcttccagaggtcagggaggctccgtacatcttccttttaatgtt
cttccagatcagtcagttggtatgaacaactccttcacagaaggcccacataattcaaat
tatagcatcttactgcaagaccagttgggtagttatggtatgaacgagcaagcaagtaat
atggcaagaagatctgattctagagcatttatggaccctcaattcttgtcaggaaccagg
gatactcctcatgaaggcaacatggtggagcaacaaaacacagccattgatagcgaggaa
ctacctagtaatgcccatagcaggcatagctcgctgagcagcgctggtggatgtgggggt
tttcacagctctgagatgggagtagataaatcacttggagaagatgttcatgatggaagg
ctgccttctactacaaccaaagggtttgacagtgctacatcgagacgccgcgtgttatct
tcccaggatgttttgtctgagtctgcactctctctacctgttaagccaagaagctcgaca
agcctcagaacttctgaaggaaaacctgctgccacaccggtctctgaatctctagcaact
agcaaaaatcatgcacagttcaggaggacttcatcttacagtgatgctggtgtctccgag
acatccttcatggatgtgctcaagaaaccagttattccagaggctgataacaggggtgca
atggagtcatctgatggaggtggccaagtgggccgaactggcaagaagaaaggcaagaaa
ggaagacagatcgatcctactctcctaggctttaaggtatccagcaaccggatcatgatg
ggtgagatccatggccttgatgattga
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integrated database retrieval system