KEGG   Fragaria vesca (woodland strawberry): 101307824
Entry
101307824         CDS       T02666                                 
Name
(RefSeq) uncharacterized LOC101307824
  KO
K18730  PERQ amino acid-rich with GYF domain-containing protein
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101307824
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     101307824
   Surveillance factors
    Other surveillance factors
     101307824
SSDB
Motif
Pfam: GYF
Other DBs
NCBI-GeneID: 101307824
NCBI-ProteinID: XP_011468197
LinkDB
Position
LG6:complement(36364232..36371377)
AA seq 1488 aa
MMAHGKVSLPQDLLPSPAIFSSSSAKADEASEGNAGEKALKGSLDESKDHLASESSIPLS
PQWLHAKAVDAKPLTSGTSGEIHAPGSLSHGNSTDSNTRDVWRSDGSRDRKDWRRNAPDL
DVNRRWREEERETGLLGRRDRKKEDRRVGVTSTRDITENRAEDHRAGGPSTRDVTENKIL
SSDRWHESRRDNKWSSRWGPEDKDKDSRIEKTDLEREDAHVDKQSLVSSNRAVPERDGDS
RDKWRPRHRMEVQSGGPAPYRAAPGFGMARGQVEKVGFASGRGRSHTSGSVQIGRPSSIS
TIGSVLDQNQSVLGKAGPFTEKYRYPRGKLLDIYRKQKIESTFDIVPEGMEHVSPITQVG
CIEPLAFVAPDADEEAGMEDIWKGRITSSDDGKGISNASLKKEEDKKISSQSEENALSTG
EVSTICGPQTQTLNEGVEGGHRVPIGTAIADGSNLVAPKNCDHKSATETDGLSNNVDELR
ISGCHDVRDFSLTKHSMSEYYEAATNVTGSQLPDSSSPFHIPSLQQASSSDHFKSNEKAD
LERVVSFEDLSLCYLDPQGNIQGPFLGIDIIQWFDQGFFGTDLLLRLTDAPDGSPFQELG
DMMPNLKTQSGSVSNSNLPTNIESLDGVGSMLEERKTAPHYEESNNLNIQHWTPSGLEPT
SSDDLHSRIRNNNYNFELQYLDNQRFQNYVERDEEIVYPGRPKSSSDFPLRRPSADIHGS
FSNSPSVPSLSDEVSESNLPNCQDDKLHPFGLLMSELRGNSHIRPAQASNVSLGMDDQAQ
FSDTLFEGGISKLNWLNNPNIPMHQVVPDMEHLIELQRQEQQQHRLLELQQQRQLEFQRQ
QQHELEFQQQRQLQQQRQLELQQQRQLELHLQQQHQLELQQQHQLELQLQRQLELQQQRQ
LEQQQQQQYHLELQQQRKLEQQLQRLQQQRQLEFQQQQRHLELQQQQRQLELQPQHQLEQ
HLRHHQNLPQHQQSQAEQLLLEQLLSRQMPGSYGQWKMDATRANLHDQLHPNDLHHVSHS
SRHNPSLEQIIQATVGEGALPVHSDFFDLISQAKLANRNTSELPLRLNEQELQAQQISMA
LREQQMEGERRVGGPWFADEAGPFVRDPAGHHQAHMLGHNSSENYQKQQRFPSNEQELSH
RNWNRASQERPQGGFYEPNPTEFDRFSVPAGSHGMNLDIANICGQDLDVHEQYQLNSSID
ERGSLSSRGQGGSVHLPFNVLPDQSVGMNNSFTEGPHNSNYSILLQDQLGSYGMNEQASN
MARRSDSRAFMDPQFLSGTRDTPHEGNMVEQQNTAIDSEELPSNAHSRHSSLSSAGGCGG
FHSSEMGVDKSLGEDVHDGRLPSTTTKGFDSATSRRRVLSSQDVLSESALSLPVKPRSST
SLRTSEGKPAATPVSESLATSKNHAQFRRTSSYSDAGVSETSFMDVLKKPVIPEADNRGA
MESSDGGGQVGRTGKKKGKKGRQIDPTLLGFKVSSNRIMMGEIHGLDD
NT seq 4467 nt   +upstreamnt  +downstreamnt
atgatggcccacggcaaagtcagtctccctcaagatctcctcccctcgccggcgatcttc
tcctcctcctccgccaaagcagatgaagcctcggaaggaaatgctggggagaaggctcta
aaagggtcacttgatgagtcaaaagatcacctagcatctgagagcagcatacctttgtct
cctcaatggctgcatgctaaggcagttgatgctaagccactcacaagtggaacatcaggg
gaaatccatgcaccagggtctttgtctcatggtaactctaccgattccaatacaagagac
gtgtggcgttcagatggttctcgggacagaaaagattggaggaggaatgcacctgattta
gatgttaaccgtcgctggcgtgaggaggagagagaaactggcttacttggtaggagggat
cgcaaaaaagaagatcgccgtgtaggagtcacttcaactagggatattactgagaataga
gcagaggatcaccgagcaggtggcccgtctactagagatgttactgagaataaaattttg
tcttctgaccgctggcatgaatcgcggagagacaataaatggtcatcaaggtggggccct
gaagataaagacaaggattctcgtatagagaaaacagatcttgagagagaagatgctcat
gttgacaagcagtctcttgtcagtagcaatcgtgcggttcctgaacgtgatggtgattct
cgtgataagtggaggccacgtcatcgcatggaggttcaatctggggggccagcgccatac
cgtgccgcaccaggatttgggatggccagaggacaggtggaaaaagtaggatttgcttct
ggacgagggaggtcccatactagtggtagtgtacagattggaagaccttcctctatatct
actattgggtctgttctggatcaaaatcaaagtgtgttgggaaaagctggcccctttact
gagaagtatcgttaccccaggggaaagctcctcgatatttatcgtaagcaaaagatagaa
tcaactttcgatattgtgcctgaagggatggagcatgtctctccaataacccaagtgggc
tgtattgagccattagcttttgtcgcacctgatgcagatgaagaggctggtatggaagat
atttggaagggaagaatcaccagcagtgatgatggtaaaggaattagtaatgcctcttta
aaaaaggaggaagataaaaagatttcatcacagtctgaagaaaatgcgctgtctactgga
gaggtctcaactatttgtggcccgcaaacacaaactttgaatgaaggggttgaaggcggg
cacagagttcctattggcacagcaattgctgatggatcgaatctggtagctccaaagaac
tgtgatcacaaaagtgctacggagactgatggcctcagtaataatgttgatgaactaaga
atttctggatgccatgatgtgagagatttcagcctcacaaagcattctatgtcggaatat
tatgaagcagctactaatgtgactggtagccagcttcctgattcaagttcaccatttcat
attccatctctgcagcaagcctcaagtagtgatcatttcaagagcaatgagaaggcagat
ctggaaagggttgtctcatttgaggatttaagtttatgctatcttgatcctcaaggaaac
atccagggacctttcctggggatcgacataattcaatggtttgatcaaggattttttggg
actgacttactgttgcgcttgactgatgcccctgatggttctccttttcaagaactcggt
gacatgatgccgaatctgaaaactcaatccggatcggtctccaactccaatttgcctacc
aacatagaatcgttggatggtgttggaagcatgttggaagagaggaaaactgctcctcac
tatgaggagtctaacaatctaaatattcaacattggactccatctggacttgaacctacc
tcaagtgatgatttgcactcaagaatacgcaataacaattacaacttcgaactccagtac
cttgataatcaaaggtttcaaaattacgttgaaagagatgaagaaatagtatatcctgga
aggcctaaaagtagcagtgattttcctctgaggagaccttcagctgatattcatggctca
ttttcaaattccccaagtgttccttccctttcagatgaagtttccgaaagcaacctacct
aattgccaggatgataagttacaccctttcggcctgttgatgtctgagctcagaggcaac
tctcatataagacctgctcaagcttccaatgtgtctttaggcatggatgatcaggcacag
tttagtgataccttgtttgagggaggcatatctaaacttaattggttgaataatcctaat
atcccaatgcatcaagtggtgcctgacatggagcatctaatagaactacagcgtcaagaa
cagcagcagcatcgcttattggagcttcagcaacaacggcagctggagtttcaacgtcag
cagcagcacgagttggagtttcaacagcagcgccaactccagcaacagcgccagttggag
ctacagcagcagcgtcagttggaacttcaccttcagcagcagcaccagttggagcttcag
cagcagcaccagttggagcttcagctgcagcgccagttggagctacagcaacagcgccag
ttggagcagcagcagcaacagcaataccatttggagcttcagcagcagcggaagctggag
cagcagctgcagcgtcttcaacaacagaggcagttggagtttcagcaacagcagcgtcac
ttagagcttcagcaacagcagcgtcaattggagcttcagcctcagcaccaattggagcag
caccttcgccatcaccaaaatttgccgcagcaccagcagtcccaagccgaacaattgctc
cttgaacagttattgagtcgacagatgcctggtagttatgggcagtggaagatggatgct
acacgagccaaccttcatgatcagttacacccaaatgatttgcaccatgtatctcattca
tcaaggcacaatccctcgcttgagcagatcatccaagcaactgtgggcgagggtgccctc
ccagtacattctgatttttttgacctcatatctcaggccaagctagcaaataggaacaca
tcagagctgccactccgccttaatgaacaagagttgcaggcacaacaaatatctatggca
ttgagagagcagcagatggaaggggaaaggcgtgttggtgggccttggtttgcagatgaa
gcaggtccttttgtgagggatcctgctgggcatcaccaggctcacatgttgggacataat
tcttcagaaaattaccagaaacagcagaggtttccatccaatgaacaggaactaagccat
cgcaattggaatcgggcctctcaggagagacctcagggaggattctatgaacctaaccct
acggaatttgataggttctcagttcctgcgggttctcatgggatgaacttggatattgca
aacatatgtggacaagatctagatgtgcacgaacaatatcagcttaattcctctattgat
gagcgtggatctctatcttccagaggtcagggaggctccgtacatcttccttttaatgtt
cttccagatcagtcagttggtatgaacaactccttcacagaaggcccacataattcaaat
tatagcatcttactgcaagaccagttgggtagttatggtatgaacgagcaagcaagtaat
atggcaagaagatctgattctagagcatttatggaccctcaattcttgtcaggaaccagg
gatactcctcatgaaggcaacatggtggagcaacaaaacacagccattgatagcgaggaa
ctacctagtaatgcccatagcaggcatagctcgctgagcagcgctggtggatgtgggggt
tttcacagctctgagatgggagtagataaatcacttggagaagatgttcatgatggaagg
ctgccttctactacaaccaaagggtttgacagtgctacatcgagacgccgcgtgttatct
tcccaggatgttttgtctgagtctgcactctctctacctgttaagccaagaagctcgaca
agcctcagaacttctgaaggaaaacctgctgccacaccggtctctgaatctctagcaact
agcaaaaatcatgcacagttcaggaggacttcatcttacagtgatgctggtgtctccgag
acatccttcatggatgtgctcaagaaaccagttattccagaggctgataacaggggtgca
atggagtcatctgatggaggtggccaagtgggccgaactggcaagaagaaaggcaagaaa
ggaagacagatcgatcctactctcctaggctttaaggtatccagcaaccggatcatgatg
ggtgagatccatggccttgatgattga

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